Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310839

Identifier: 18310839

GI number: 18310839

Start: 2125749

End: 2126465

Strand: Reverse

Name: 18310839

Synonym: CPE1857

Alternate gene names: NA

Gene position: 2126465-2125749 (Counterclockwise)

Preceding gene: 18310840

Following gene: 18310838

Centisome position: 70.15

GC content: 29.15

Gene sequence:

>717_bases
TTGAAGAAGTTGTCTTCACAAATTATTATAGGTATAGTTTGTGCTTTGTTAGGGTTTTTATTAACCTACCAATTTAAAAT
TATAAATAATAAAGAGAAAAATATAATAGAAAATTATAACCAAAATGACATAATGGCAGAGATAGACGGTCTTAAGAAGG
AGAAAGAAGAGCTTCAAAAGAATAATGATTCTTTAAATAAGAGGCTTAAAGAAATGGAGGATGCAGCAGCATCTAAAGGG
GATGTAAATAATAAAATAAAAGAGCAATTAGATAAAACAAGAATGATTTTAGGAACTGAAGAGGTTAAGGGTCCAGGAAT
AATTTTATCCATAACACCTAAATCTCCATTGCTTACTTCAAAGGATCCTGAATATATAAGTGAAAAGGAGATAATTCACA
TATTAAACTTATTAGCTTTCTCAGGTGCAGAAGCTATTGCAGTTAATGATATTAGAATAACTCCTCAGACAGGAATAAAG
AATGCTAGTAACTTTATATGGATAGGAAATAATGAAAGAATTTCTCCAAAGGAGAAGCTAACAATAAAGGTTATTGGTAA
TCAAGATAACTTAATAAAAGGAATTGATTTCCCAGGGGAAATGGACTATGGAGTATTAGGAGGTAATTATGATTATAAAT
ATGAGAAAAAAGATTCAATTACAATACCTAAGACTACTCAAAACCTATCTTCTGAATATTTAAAAAAGGTTGATTAG

Upstream 100 bases:

>100_bases
ATATTAAATGATCCAGCAGGAAATTTTGAAAAGGGATATATAAACATAAGCTTTAATGGGAATCCTGTAATATATAAAGA
AAAGTAAGGAGGAGTGCTTT

Downstream 100 bases:

>100_bases
GAAGGTGATTGAATGATAGTATTTATTGGGCTTTTAGTAGGTATAATAATAGGAGTTATATTTCCAGGAAGCATACCAGA
TAAGTTTTCCCCATATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKKLSSQIIIGIVCALLGFLLTYQFKIINNKEKNIIENYNQNDIMAEIDGLKKEKEELQKNNDSLNKRLKEMEDAAASKG
DVNNKIKEQLDKTRMILGTEEVKGPGIILSITPKSPLLTSKDPEYISEKEIIHILNLLAFSGAEAIAVNDIRITPQTGIK
NASNFIWIGNNERISPKEKLTIKVIGNQDNLIKGIDFPGEMDYGVLGGNYDYKYEKKDSITIPKTTQNLSSEYLKKVD

Sequences:

>Translated_238_residues
MKKLSSQIIIGIVCALLGFLLTYQFKIINNKEKNIIENYNQNDIMAEIDGLKKEKEELQKNNDSLNKRLKEMEDAAASKG
DVNNKIKEQLDKTRMILGTEEVKGPGIILSITPKSPLLTSKDPEYISEKEIIHILNLLAFSGAEAIAVNDIRITPQTGIK
NASNFIWIGNNERISPKEKLTIKVIGNQDNLIKGIDFPGEMDYGVLGGNYDYKYEKKDSITIPKTTQNLSSEYLKKVD
>Mature_238_residues
MKKLSSQIIIGIVCALLGFLLTYQFKIINNKEKNIIENYNQNDIMAEIDGLKKEKEELQKNNDSLNKRLKEMEDAAASKG
DVNNKIKEQLDKTRMILGTEEVKGPGIILSITPKSPLLTSKDPEYISEKEIIHILNLLAFSGAEAIAVNDIRITPQTGIK
NASNFIWIGNNERISPKEKLTIKVIGNQDNLIKGIDFPGEMDYGVLGGNYDYKYEKKDSITIPKTTQNLSSEYLKKVD

Specific function: Unknown

COG id: COG3879

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26763; Mature: 26763

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSSQIIIGIVCALLGFLLTYQFKIINNKEKNIIENYNQNDIMAEIDGLKKEKEELQK
CCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NNDSLNKRLKEMEDAAASKGDVNNKIKEQLDKTRMILGTEEVKGPGIILSITPKSPLLTS
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCC
KDPEYISEKEIIHILNLLAFSGAEAIAVNDIRITPQTGIKNASNFIWIGNNERISPKEKL
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEE
TIKVIGNQDNLIKGIDFPGEMDYGVLGGNYDYKYEKKDSITIPKTTQNLSSEYLKKVD
EEEEECCCCCEEECCCCCCCCCCEEECCCCCCEECCCCCEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLSSQIIIGIVCALLGFLLTYQFKIINNKEKNIIENYNQNDIMAEIDGLKKEKEELQK
CCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NNDSLNKRLKEMEDAAASKGDVNNKIKEQLDKTRMILGTEEVKGPGIILSITPKSPLLTS
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCC
KDPEYISEKEIIHILNLLAFSGAEAIAVNDIRITPQTGIKNASNFIWIGNNERISPKEKL
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEE
TIKVIGNQDNLIKGIDFPGEMDYGVLGGNYDYKYEKKDSITIPKTTQNLSSEYLKKVD
EEEEECCCCCEEECCCCCCCCCCEEECCCCCCEECCCCCEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA