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The map label for this gene is sbp [H]

Identifier: 18310838

GI number: 18310838

Start: 2125398

End: 2125736

Strand: Reverse

Name: sbp [H]

Synonym: CPE1856

Alternate gene names: 18310838

Gene position: 2125736-2125398 (Counterclockwise)

Preceding gene: 18310839

Following gene: 18310837

Centisome position: 70.12

GC content: 31.27

Gene sequence:

>339_bases
ATGATAGTATTTATTGGGCTTTTAGTAGGTATAATAATAGGAGTTATATTTCCAGGAAGCATACCAGATAAGTTTTCCCC
ATATTTATCTATAGCCATAGTTGCATGCTTAGATTCTGTTTTTGGAGCTATAAAGGCTAGTTTAAAGAAAGAATTTCAAG
CTGATGTTTTTATATCAGGATTCTTTGGAAATGCAGCTTTAGCAGCTTTACTAGCATATCTAGGTGATAAACTTGGAATA
CCACTATACTTTGCAGCTGTAATAGTATTTGGTAGTAGAATATTTAATAACTTTGCAGCTATAAGAAGGATATTGTTAGA
TAAAAGCAAAGAACGATAA

Upstream 100 bases:

>100_bases
TGATTATAAATATGAGAAAAAAGATTCAATTACAATACCTAAGACTACTCAAAACCTATCTTCTGAATATTTAAAAAAGG
TTGATTAGGAAGGTGATTGA

Downstream 100 bases:

>100_bases
AGAGGTGATGCTTTGAAAAATAGAGAATTTACTATTTTTATATTTACAGCTTCCGTTATAGTTGGACTTTTAATATCTAT
GAATATAAGTTTTGATGGAA

Product: small basic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MIVFIGLLVGIIIGVIFPGSIPDKFSPYLSIAIVACLDSVFGAIKASLKKEFQADVFISGFFGNAALAALLAYLGDKLGI
PLYFAAVIVFGSRIFNNFAAIRRILLDKSKER

Sequences:

>Translated_112_residues
MIVFIGLLVGIIIGVIFPGSIPDKFSPYLSIAIVACLDSVFGAIKASLKKEFQADVFISGFFGNAALAALLAYLGDKLGI
PLYFAAVIVFGSRIFNNFAAIRRILLDKSKER
>Mature_112_residues
MIVFIGLLVGIIIGVIFPGSIPDKFSPYLSIAIVACLDSVFGAIKASLKKEFQADVFISGFFGNAALAALLAYLGDKLGI
PLYFAAVIVFGSRIFNNFAAIRRILLDKSKER

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 12060; Mature: 12060

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFIGLLVGIIIGVIFPGSIPDKFSPYLSIAIVACLDSVFGAIKASLKKEFQADVFISG
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGNAALAALLAYLGDKLGIPLYFAAVIVFGSRIFNNFAAIRRILLDKSKER
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIVFIGLLVGIIIGVIFPGSIPDKFSPYLSIAIVACLDSVFGAIKASLKKEFQADVFISG
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGNAALAALLAYLGDKLGIPLYFAAVIVFGSRIFNNFAAIRRILLDKSKER
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3139638; 9384377; 1569582 [H]