| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is ppnK [H]
Identifier: 18310799
GI number: 18310799
Start: 2095482
End: 2096312
Strand: Reverse
Name: ppnK [H]
Synonym: CPE1817
Alternate gene names: 18310799
Gene position: 2096312-2095482 (Counterclockwise)
Preceding gene: 18310800
Following gene: 18310798
Centisome position: 69.15
GC content: 28.4
Gene sequence:
>831_bases ATGAGAAATATAGGAATTATAATTAATAAAGAAAAAGATAAAGAAAATAAAATTTTAAATTTGGTTATTTTAAAGGTTAA AGAATATCTAAATCCTGATGAAATAAAAGTTATAGACCAATTTTATAAGGGAGATTATAAAGATTTAATGTCTTTAGATC TTTTAATAGTCCTTGGTGGAGATGGAACGCTTTTAGGTGTGGCTAGAAAATTCTCTACAGTTATAGATACTCCAATTTTA GGAATTAACATTGGAAATTTAGGCTTTTTAGTTACAGCTGAGATAAGCGAATTAGATGAAGCTTTATATAGAATAAAGGT TGGTGATTATAAGGTAGAGGAAAGAATGTTACTTTCTTGTACTATAGAAGGGGTAACTTGTTCAGAGGAAAGGGCTTTAA ATGATATTGTTGTTGCTAGGGGAACATTATCTAGAATGGCACAATATGAGGTCTTTATAAATGATGAACTTTATGCTACT TTTAAAGGGGATGGAGTTATAATTTCTACTCCAGTTGGATCAACAGCCTATTCTTTTTCAGCTGGAGGCCCGCTTATAAT GCCAGATTTACAAATAGTATCAATAGTCCCTATATGTCCTCATACACCTAATTCAAGACCTATGATAATAGATGGAAATA ACAAGGTAAGAGTTAAGCCTCTTATTAATGAATCAGATGTCTTTGTTACAATAGATGGACAAAAAGCATTAAAGTTAGAA AAACATAATGAAGTTTTAATAAAAAAAGCAAAAGAATTTTTTAGAATAATTTCATTTGATAATAAAAGTTATTTTAAGGT ACTAAGGAAAAAATTATTTAAGATAGAATAA
Upstream 100 bases:
>100_bases TCATAGTGATTTATAAAGATTAAATTATTAAATAAGAAATATTAATTTTATAATTACTTTAGAGAGACTGCATAGTTAAA GTAAAGGTGTGTTTTGGGGC
Downstream 100 bases:
>100_bases ATATTATGAAGGTGAGTTGAAGATGAAATCTAAGAGACATTCTAAGATAATTGAAATTATAAAATCAACAGCGATAGAAA CTCAAGAAGAGTTAGCGGAA
Product: NAD(+)/NADH kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRNIGIIINKEKDKENKILNLVILKVKEYLNPDEIKVIDQFYKGDYKDLMSLDLLIVLGGDGTLLGVARKFSTVIDTPIL GINIGNLGFLVTAEISELDEALYRIKVGDYKVEERMLLSCTIEGVTCSEERALNDIVVARGTLSRMAQYEVFINDELYAT FKGDGVIISTPVGSTAYSFSAGGPLIMPDLQIVSIVPICPHTPNSRPMIIDGNNKVRVKPLINESDVFVTIDGQKALKLE KHNEVLIKKAKEFFRIISFDNKSYFKVLRKKLFKIE
Sequences:
>Translated_276_residues MRNIGIIINKEKDKENKILNLVILKVKEYLNPDEIKVIDQFYKGDYKDLMSLDLLIVLGGDGTLLGVARKFSTVIDTPIL GINIGNLGFLVTAEISELDEALYRIKVGDYKVEERMLLSCTIEGVTCSEERALNDIVVARGTLSRMAQYEVFINDELYAT FKGDGVIISTPVGSTAYSFSAGGPLIMPDLQIVSIVPICPHTPNSRPMIIDGNNKVRVKPLINESDVFVTIDGQKALKLE KHNEVLIKKAKEFFRIISFDNKSYFKVLRKKLFKIE >Mature_276_residues MRNIGIIINKEKDKENKILNLVILKVKEYLNPDEIKVIDQFYKGDYKDLMSLDLLIVLGGDGTLLGVARKFSTVIDTPIL GINIGNLGFLVTAEISELDEALYRIKVGDYKVEERMLLSCTIEGVTCSEERALNDIVVARGTLSRMAQYEVFINDELYAT FKGDGVIISTPVGSTAYSFSAGGPLIMPDLQIVSIVPICPHTPNSRPMIIDGNNKVRVKPLINESDVFVTIDGQKALKLE KHNEVLIKKAKEFFRIISFDNKSYFKVLRKKLFKIE
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=237, Percent_Identity=27.8481012658228, Blast_Score=88, Evalue=8e-18, Organism=Escherichia coli, GI1788968, Length=223, Percent_Identity=37.6681614349776, Blast_Score=160, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320794, Length=263, Percent_Identity=31.5589353612167, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6322509, Length=263, Percent_Identity=28.1368821292776, Blast_Score=115, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6325068, Length=183, Percent_Identity=32.7868852459016, Blast_Score=114, Evalue=1e-26, Organism=Drosophila melanogaster, GI28573832, Length=210, Percent_Identity=29.5238095238095, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28573826, Length=210, Percent_Identity=29.5238095238095, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI28573830, Length=210, Percent_Identity=29.5238095238095, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI161077047, Length=210, Percent_Identity=29.5238095238095, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI28573828, Length=210, Percent_Identity=29.5238095238095, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24653424, Length=212, Percent_Identity=25, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281363323, Length=212, Percent_Identity=25, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI281363321, Length=212, Percent_Identity=25, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24653422, Length=212, Percent_Identity=25, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI20129957, Length=213, Percent_Identity=24.8826291079812, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 30963; Mature: 30963
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIGIIINKEKDKENKILNLVILKVKEYLNPDEIKVIDQFYKGDYKDLMSLDLLIVLGG CCCEEEEEECCCCCCCCEEHHEEEEHHHHCCCCHHHHHHHHHCCCHHHHCCEEEEEEECC DGTLLGVARKFSTVIDTPILGINIGNLGFLVTAEISELDEALYRIKVGDYKVEERMLLSC CCEEEHHHHHHHHHHCCCEEEEEECCEEEEEEEEHHHHHHHHHEEEECCEEECCEEEEEE TIEGVTCSEERALNDIVVARGTLSRMAQYEVFINDELYATFKGDGVIISTPVGSTAYSFS EEECEECCHHHCCHHEEEECCHHHHHEEEEEEECCEEEEEEECCCEEEECCCCCCEEEEC AGGPLIMPDLQIVSIVPICPHTPNSRPMIIDGNNKVRVKPLINESDVFVTIDGQKALKLE CCCCEEECCCEEEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCEEEEECCCCEEEEE KHNEVLIKKAKEFFRIISFDNKSYFKVLRKKLFKIE CCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRNIGIIINKEKDKENKILNLVILKVKEYLNPDEIKVIDQFYKGDYKDLMSLDLLIVLGG CCCEEEEEECCCCCCCCEEHHEEEEHHHHCCCCHHHHHHHHHCCCHHHHCCEEEEEEECC DGTLLGVARKFSTVIDTPILGINIGNLGFLVTAEISELDEALYRIKVGDYKVEERMLLSC CCEEEHHHHHHHHHHCCCEEEEEECCEEEEEEEEHHHHHHHHHEEEECCEEECCEEEEEE TIEGVTCSEERALNDIVVARGTLSRMAQYEVFINDELYATFKGDGVIISTPVGSTAYSFS EEECEECCHHHCCHHEEEECCHHHHHEEEEEEECCEEEEEEECCCEEEECCCCCCEEEEC AGGPLIMPDLQIVSIVPICPHTPNSRPMIIDGNNKVRVKPLINESDVFVTIDGQKALKLE CCCCEEECCCEEEEEEEECCCCCCCCEEEEECCCEEEEEEEECCCCEEEEECCCCEEEEE KHNEVLIKKAKEFFRIISFDNKSYFKVLRKKLFKIE CCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA