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The map label for this gene is scpA

Identifier: 18310787

GI number: 18310787

Start: 2084144

End: 2084890

Strand: Reverse

Name: scpA

Synonym: CPE1805

Alternate gene names: 18310787

Gene position: 2084890-2084144 (Counterclockwise)

Preceding gene: 18310788

Following gene: 18310786

Centisome position: 68.78

GC content: 27.44

Gene sequence:

>747_bases
ATGGAAATGCCAATTATCAAACTTAAAAACTTTGATGGACCTTTTGATTTGCTTTTGCATTTAATCAAAAAAAATGAAAT
GAGTATTACTGAGATAAAGATTCATGAAATCACAAAACAGTATTTAGAATATATAGCCTTAATGAAGGAACTTGATTTAG
AAATAACTTCAGAGTTTATAGTTATGGCAGCTACTTTAATAGAAATAAAATCGAAATCATTACTTCCTAAGGTTAAAGTT
GAAGATGAGACTTGTGAGGAAGATCTTCAGAAAATATTAATGGAAAAACTTCAAGAGTATAAAAAGTTTAAGAAAATAAG
TGCTTATTTAAGAGAAAGAGAACTTTCTACTGGAGAAGTATTTACAAAAAAAGCTGAAATTATTGAAGTTGAAGTGGACA
ACAAACTTGATGATGATTACTTTAAAAATATAACTATGCTTGATCTTTATAAGCTCTATAACAATCTTATGAGAATTTAC
GGTGAAAAACAAAATGTAAATGTTATGGAGAAAAAGATAAGTGTAGATAAATATAAAATTACTGATAAAATTAATTTCTT
AAGGGATAAGCTAAGTGAAAAGAGCATTGTTAGGTTTTCAGAGTTTATACCACAGTGCGAATGTAAGCTAGAAGTAGTTG
TTACTTTTATGGCAATGCTTGAACTTATAAAAAGAAGTGAAATTAAAGTTGTCCAATATGAAAACTTTGGTGAGATTATG
ATGGAAAAGGTGATAGTAAATGAGTGA

Upstream 100 bases:

>100_bases
TCAAATTCTTGTATCTCTTAAACTTAGTGTTAATTGCTTTTTTATATGATAGTTGTTATGATATTATGTGAAGTTTTGAA
TAGTAGGAGAAAAATAGACT

Downstream 100 bases:

>100_bases
TATAAATCAAATAGAATTTAGTGAAATATCTAAAAAAGACGAGCTTAAGTCTATTATAGAATCTCTTTTATTTGTTAGTG
GAGAACCTCTTGCTTTAAAG

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEMPIIKLKNFDGPFDLLLHLIKKNEMSITEIKIHEITKQYLEYIALMKELDLEITSEFIVMAATLIEIKSKSLLPKVKV
EDETCEEDLQKILMEKLQEYKKFKKISAYLRERELSTGEVFTKKAEIIEVEVDNKLDDDYFKNITMLDLYKLYNNLMRIY
GEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFIPQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIM
MEKVIVNE

Sequences:

>Translated_248_residues
MEMPIIKLKNFDGPFDLLLHLIKKNEMSITEIKIHEITKQYLEYIALMKELDLEITSEFIVMAATLIEIKSKSLLPKVKV
EDETCEEDLQKILMEKLQEYKKFKKISAYLRERELSTGEVFTKKAEIIEVEVDNKLDDDYFKNITMLDLYKLYNNLMRIY
GEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFIPQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIM
MEKVIVNE
>Mature_248_residues
MEMPIIKLKNFDGPFDLLLHLIKKNEMSITEIKIHEITKQYLEYIALMKELDLEITSEFIVMAATLIEIKSKSLLPKVKV
EDETCEEDLQKILMEKLQEYKKFKKISAYLRERELSTGEVFTKKAEIIEVEVDNKLDDDYFKNITMLDLYKLYNNLMRIY
GEKQNVNVMEKKISVDKYKITDKINFLRDKLSEKSIVRFSEFIPQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIM
MEKVIVNE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_CLOP1 (Q0TPF1)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696489.1
- STRING:   Q0TPF1
- GeneID:   4203617
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_2060
- TIGR:   CPF_2060
- eggNOG:   COG1354
- HOGENOM:   HBG728383
- OMA:   CECKLEC
- ProtClustDB:   PRK00104
- BioCyc:   CPER195103:CPF_2060-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29442; Mature: 29442

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMPIIKLKNFDGPFDLLLHLIKKNEMSITEIKIHEITKQYLEYIALMKELDLEITSEFI
CCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLIEIKSKSLLPKVKVEDETCEEDLQKILMEKLQEYKKFKKISAYLRERELSTGEV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FTKKAEIIEVEVDNKLDDDYFKNITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKI
HHHHHHEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHH
TDKINFLRDKLSEKSIVRFSEFIPQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHH
MEKVIVNE
HHHHHCCC
>Mature Secondary Structure
MEMPIIKLKNFDGPFDLLLHLIKKNEMSITEIKIHEITKQYLEYIALMKELDLEITSEFI
CCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLIEIKSKSLLPKVKVEDETCEEDLQKILMEKLQEYKKFKKISAYLRERELSTGEV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FTKKAEIIEVEVDNKLDDDYFKNITMLDLYKLYNNLMRIYGEKQNVNVMEKKISVDKYKI
HHHHHHEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHH
TDKINFLRDKLSEKSIVRFSEFIPQCECKLEVVVTFMAMLELIKRSEIKVVQYENFGEIM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHH
MEKVIVNE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA