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The map label for this gene is spoIIGA [H]

Identifier: 18310745

GI number: 18310745

Start: 2041169

End: 2041975

Strand: Reverse

Name: spoIIGA [H]

Synonym: CPE1763

Alternate gene names: 18310745

Gene position: 2041975-2041169 (Counterclockwise)

Preceding gene: 18310746

Following gene: 18310744

Centisome position: 67.36

GC content: 25.53

Gene sequence:

>807_bases
ATGACTGTATATATTGACATTGTCATATTAGAAAATTTTTTAATTAACTTTTTTCTACTTTATTTAACTTTACAGACCTT
AAAAGATACAATAATTTACAAGAGAATAATATTAGCAGCTTTTTTAGGAGCAATATATACCTTGTTTGTTTTTGTTCCAG
GATTAAATATACTCACATCATTGCCTTTAAAACTACTTTTTTCTTTTGGAATGATTACTATAATATCAGAAAGAAGAGAG
TTAAAGACAATAATAAAAAGATATATAACTTTTTTAGTGATAACTTTTGCCTTTTGTGGTACTTGTTTTATGTTTGCTTT
AGTTGAAAATCAGTATAATATTTCAGAATCCTTTATAATAAATGATTATTCAACTAAATCTATAATATTCTCACTAATTA
TAAGTTACATACTTGTTAGTGGAGTTATGAATTATTTTAAAAATAGAGCTATTATAAATAACTTTATATATGATTTAGAT
GTATGTATTGATTCAGAAGTTGTTAATATTAAAGCTTTTTTAGATACAGGAAATGGACTTGTAGAGCCTGCAACTGCATT
GCCTGTAATAATAGCAGAAAGAGAAAAGTTTAGATGGGTAAACATTAAGGAAAAAGATCAATTTAGGATACCGTATAAAG
TAGTTGATGGGAATTCAGGATATATGAAAGGGATTAAGATTGACAATATAAAGCTTTGTAATGTTAATGGGGAAACAATG
ACAAGAGATGCAATCTTATGTTTTTGTGATAATAAATTAAGTAAAGAGGGAGAATATGAAGCTTTATTGTCTAGAGGAAT
TATATAG

Upstream 100 bases:

>100_bases
ATGAGGAAAAAGAAAGATAGAAAATATGCATATGGAATATATAATGACAAAATTTTAGAATAAGAAGCTTTATAATTATA
AATAGGGAGTGAGTTGATTT

Downstream 100 bases:

>100_bases
GGGTGATTAGGTTATGTTAAATATAAGACTTTTGCTTAATAAGTTATTTACTAAATTAGATATTATGGTAGAACCAATTT
ATTATGTTGGGGGGAATGAT

Product: sporulation factor SpoIIGA

Products: NA

Alternate protein names: Stage II sporulation protein GA [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTVYIDIVILENFLINFFLLYLTLQTLKDTIIYKRIILAAFLGAIYTLFVFVPGLNILTSLPLKLLFSFGMITIISERRE
LKTIIKRYITFLVITFAFCGTCFMFALVENQYNISESFIINDYSTKSIIFSLIISYILVSGVMNYFKNRAIINNFIYDLD
VCIDSEVVNIKAFLDTGNGLVEPATALPVIIAEREKFRWVNIKEKDQFRIPYKVVDGNSGYMKGIKIDNIKLCNVNGETM
TRDAILCFCDNKLSKEGEYEALLSRGII

Sequences:

>Translated_268_residues
MTVYIDIVILENFLINFFLLYLTLQTLKDTIIYKRIILAAFLGAIYTLFVFVPGLNILTSLPLKLLFSFGMITIISERRE
LKTIIKRYITFLVITFAFCGTCFMFALVENQYNISESFIINDYSTKSIIFSLIISYILVSGVMNYFKNRAIINNFIYDLD
VCIDSEVVNIKAFLDTGNGLVEPATALPVIIAEREKFRWVNIKEKDQFRIPYKVVDGNSGYMKGIKIDNIKLCNVNGETM
TRDAILCFCDNKLSKEGEYEALLSRGII
>Mature_267_residues
TVYIDIVILENFLINFFLLYLTLQTLKDTIIYKRIILAAFLGAIYTLFVFVPGLNILTSLPLKLLFSFGMITIISERREL
KTIIKRYITFLVITFAFCGTCFMFALVENQYNISESFIINDYSTKSIIFSLIISYILVSGVMNYFKNRAIINNFIYDLDV
CIDSEVVNIKAFLDTGNGLVEPATALPVIIAEREKFRWVNIKEKDQFRIPYKVVDGNSGYMKGIKIDNIKLCNVNGETMT
RDAILCFCDNKLSKEGEYEALLSRGII

Specific function: Probably activates RNA polymerase sigma-E factor at the stage II of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 30714; Mature: 30583

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYIDIVILENFLINFFLLYLTLQTLKDTIIYKRIILAAFLGAIYTLFVFVPGLNILTS
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LPLKLLFSFGMITIISERRELKTIIKRYITFLVITFAFCGTCFMFALVENQYNISESFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
NDYSTKSIIFSLIISYILVSGVMNYFKNRAIINNFIYDLDVCIDSEVVNIKAFLDTGNGL
ECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEECCCEEEEEEEEECCCCC
VEPATALPVIIAEREKFRWVNIKEKDQFRIPYKVVDGNSGYMKGIKIDNIKLCNVNGETM
CCCHHHCCEEEECCCCEEEECCCCCCCEECCEEEEECCCCEEECEEECCEEEEECCCCCC
TRDAILCFCDNKLSKEGEYEALLSRGII
HHCEEEEEECCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TVYIDIVILENFLINFFLLYLTLQTLKDTIIYKRIILAAFLGAIYTLFVFVPGLNILTS
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LPLKLLFSFGMITIISERRELKTIIKRYITFLVITFAFCGTCFMFALVENQYNISESFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
NDYSTKSIIFSLIISYILVSGVMNYFKNRAIINNFIYDLDVCIDSEVVNIKAFLDTGNGL
ECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEECCCEEEEEEEEECCCCC
VEPATALPVIIAEREKFRWVNIKEKDQFRIPYKVVDGNSGYMKGIKIDNIKLCNVNGETM
CCCHHHCCEEEECCCCEEEECCCCCCCEECCEEEEECCCCEEECEEECCEEEEECCCCCC
TRDAILCFCDNKLSKEGEYEALLSRGII
HHCEEEEEECCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961408; 7883192; 11466286 [H]