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The map label for this gene is 18310693

Identifier: 18310693

GI number: 18310693

Start: 1989238

End: 1989465

Strand: Reverse

Name: 18310693

Synonym: CPE1711

Alternate gene names: NA

Gene position: 1989465-1989238 (Counterclockwise)

Preceding gene: 18310694

Following gene: 18310692

Centisome position: 65.63

GC content: 32.46

Gene sequence:

>228_bases
ATGAAGGAATTAGTTGAAATAATTGCTAAGTCACTAGTAGATAAACCTGAGGATGTTCATGTAAATGAGGTCTTAGGAGA
GGAATCAATCATATTAGAACTAAAGGTATCACCTGAAGATATGGGAAAAGTTATTGGAAAGCAAGGTAGAATTGCCAAAG
CTATCAGAACAGTAGTGAAAGCTGCTGCAATTAAAGAAAATAAAAAAGTTGTAGTAGAAATCATTTAA

Upstream 100 bases:

>100_bases
GGTGCACAACCAACTGATATAGTTAAAAAATTATTCAACCAAGCTGGTATAAAATAGTTTTCCTAGGGGGTGAATCTACT
TATTTTTAAGTAGGAATAAT

Downstream 100 bases:

>100_bases
AAAGAGTTAGGGGAATACCTAACTCTTATTTTATATACAGAAAAGGGGTGTAATAATGGAAGATTTATTAGTAGTTGGTC
AAATAATAAACACTCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKAIRTVVKAAAIKENKKVVVEII

Sequences:

>Translated_75_residues
MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKAIRTVVKAAAIKENKKVVVEII
>Mature_75_residues
MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKAIRTVVKAAAIKENKKVVVEII

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1711_CLOPE (Q8XJP5)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562627.1
- GeneID:   990021
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1711
- NMPDR:   fig|195102.1.peg.1774
- HOGENOM:   HBG668070
- OMA:   QGRIARA
- ProtClustDB:   PRK00468
- BioCyc:   CPER195102:CPE1711-MONOMER
- HAMAP:   MF_00088
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627

Pfam domain/function: PF00013 KH_1; SSF54814 KH_prok

EC number: NA

Molecular weight: Translated: 8231; Mature: 8231

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKAIRTVVK
CHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
AAAIKENKKVVVEII
HHHHCCCCEEEEEEC
>Mature Secondary Structure
MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKAIRTVVK
CHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
AAAIKENKKVVVEII
HHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842