Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is cdsA [H]

Identifier: 18310677

GI number: 18310677

Start: 1974432

End: 1975226

Strand: Reverse

Name: cdsA [H]

Synonym: CPE1695

Alternate gene names: 18310677

Gene position: 1975226-1974432 (Counterclockwise)

Preceding gene: 18310678

Following gene: 18310676

Centisome position: 65.16

GC content: 27.3

Gene sequence:

>795_bases
GTGAAATCTAATAGCAGATATCTAGGCGCACTTATAATGGCTCCATTTATTGCGTTTATATTCCTAGGTGGAATTTGGCT
TAAGCTATTTACTATTGCTCTTTCTTTTGCAGGATTATATGAATATTATAAAACTGTTAAAATAGCAAAATTAAAGCCTA
TTTCTATAGGGGGATATATATTATTAATATTATATTACTTAACTTCAAATAATTTTGAAATGTTATCATTTTTAATAATA
ATAGCTACATTTATATTACTTTGTGTTCCTATACTTAATATTGAATATACATTTATAGATGTTGCAGTTACTATTTTAGG
ATTTATATATGTAGGAGTTTTCTTTAGCTTCATACATTTAGTAAACATCAAAGAAGGTGGACAATACCTAGTTTGGTTAA
TATTCCTATCATCATGGCTTTGTGATACTGCTGCATACTATTCAGGTAGATTCTTTGGTAAACACAAATTATGTCCAAAG
GTTAGTCCTAAGAAGACTATAGAAGGTTCTATAGGAGGAATATTAGGAAGTACATTAGCTTGTGGAATATTTGGTATAAT
AATATCTAATAGTTTCTCTTTAATACCTGTATATCATTATTTTATAATAGGTATATTATGTGGAGTATTCTGTCAATTTG
GTGATTTAGTTGCTTCATCAATAAAGAGATACGCAGGAATAAAAGATTATAGTAATTTAATACCAGGACATGGTGGAATA
TTAGATAGATTTGACAGTATATTATTTGCTGGAACAATAGTATTCTTCTATTTAACACTTGTCTTAAAATTTTAA

Upstream 100 bases:

>100_bases
GGCCAGATTTTAATGGTGAAGATTTAAGAAAAGCTATTTTTGATTATCAAAATAGAGATAGAAGATTTGGTGGAATTAAA
TAAATAATGAGGTGATTTGG

Downstream 100 bases:

>100_bases
TGCTTTAGATTTTCTAAAGCATTTTTTTTATAAAAAATTTTATTTATATTTATTTGTAGGCATAAAAATTTTATTATACT
TTTAACTTAAAAAGAAAAAT

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKSNSRYLGALIMAPFIAFIFLGGIWLKLFTIALSFAGLYEYYKTVKIAKLKPISIGGYILLILYYLTSNNFEMLSFLII
IATFILLCVPILNIEYTFIDVAVTILGFIYVGVFFSFIHLVNIKEGGQYLVWLIFLSSWLCDTAAYYSGRFFGKHKLCPK
VSPKKTIEGSIGGILGSTLACGIFGIIISNSFSLIPVYHYFIIGILCGVFCQFGDLVASSIKRYAGIKDYSNLIPGHGGI
LDRFDSILFAGTIVFFYLTLVLKF

Sequences:

>Translated_264_residues
MKSNSRYLGALIMAPFIAFIFLGGIWLKLFTIALSFAGLYEYYKTVKIAKLKPISIGGYILLILYYLTSNNFEMLSFLII
IATFILLCVPILNIEYTFIDVAVTILGFIYVGVFFSFIHLVNIKEGGQYLVWLIFLSSWLCDTAAYYSGRFFGKHKLCPK
VSPKKTIEGSIGGILGSTLACGIFGIIISNSFSLIPVYHYFIIGILCGVFCQFGDLVASSIKRYAGIKDYSNLIPGHGGI
LDRFDSILFAGTIVFFYLTLVLKF
>Mature_264_residues
MKSNSRYLGALIMAPFIAFIFLGGIWLKLFTIALSFAGLYEYYKTVKIAKLKPISIGGYILLILYYLTSNNFEMLSFLII
IATFILLCVPILNIEYTFIDVAVTILGFIYVGVFFSFIHLVNIKEGGQYLVWLIFLSSWLCDTAAYYSGRFFGKHKLCPK
VSPKKTIEGSIGGILGSTLACGIFGIIISNSFSLIPVYHYFIIGILCGVFCQFGDLVASSIKRYAGIKDYSNLIPGHGGI
LDRFDSILFAGTIVFFYLTLVLKF

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=135, Percent_Identity=43.7037037037037, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787677, Length=117, Percent_Identity=41.8803418803419, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 29451; Mature: 29451

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA