Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310661

Identifier: 18310661

GI number: 18310661

Start: 1955789

End: 1956064

Strand: Reverse

Name: 18310661

Synonym: CPE1679

Alternate gene names: NA

Gene position: 1956064-1955789 (Counterclockwise)

Preceding gene: 18310662

Following gene: 18310660

Centisome position: 64.53

GC content: 26.09

Gene sequence:

>276_bases
ATGAGTAATAATGTTAGATATTTAAGCGAAATAGAAAGATATGAAATTATAAACATAAATGATGGTGAAAAGTATAGCGG
ACTTATAAATAATGATGTTATTATAGATGAAGAAGGAAAGCTAAAATATTTAATAGTAAACTTAGGTGGTGGCAAGTTTA
ATCTTTTTAACTCAGATGAATACTTAGAAATCGAGTGGGAAAATGTAAAAAGAATAGGAGCTAAAACCATAATATTAGAT
GTAGATAGTGATATGATAAAAAAAACTAAGCTGTAG

Upstream 100 bases:

>100_bases
TCTTATTCATAAAGCCTACCTCTTTTAATGAGAATTGACATATATTATTTATAATCAACATATTATTTATTGTTTTAATA
AATAAGTGGAGGTATGTTTT

Downstream 100 bases:

>100_bases
GAGTGTGGGGATTTTGAAAATAGTAGTACAAAAATTTGGTGGTACTTCTGTATCAACAAAAGAAAGAAGAACTATGGTTG
TAGAAAAGGTAAAAGGGGCA

Product: PRC-barrel domain protein

Products: NA

Alternate protein names: Sporulation Protein YlmC/YmxH Family; PRC-Barrel Domain-Containing Protein; Sporulation Protein YlmC/YmxH

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSNNVRYLSEIERYEIININDGEKYSGLINNDVIIDEEGKLKYLIVNLGGGKFNLFNSDEYLEIEWENVKRIGAKTIILD
VDSDMIKKTKL

Sequences:

>Translated_91_residues
MSNNVRYLSEIERYEIININDGEKYSGLINNDVIIDEEGKLKYLIVNLGGGKFNLFNSDEYLEIEWENVKRIGAKTIILD
VDSDMIKKTKL
>Mature_90_residues
SNNVRYLSEIERYEIININDGEKYSGLINNDVIIDEEGKLKYLIVNLGGGKFNLFNSDEYLEIEWENVKRIGAKTIILDV
DSDMIKKTKL

Specific function: Unknown

COG id: COG1873

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10530; Mature: 10399

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNVRYLSEIERYEIININDGEKYSGLINNDVIIDEEGKLKYLIVNLGGGKFNLFNSDE
CCCCCCHHCCCCEEEEEECCCCCCCCCEECCCEEEECCCCEEEEEEEECCCEEEEECCCC
YLEIEWENVKRIGAKTIILDVDSDMIKKTKL
EEEEEECCCCCCCCEEEEEECCCCHHHCCCC
>Mature Secondary Structure 
SNNVRYLSEIERYEIININDGEKYSGLINNDVIIDEEGKLKYLIVNLGGGKFNLFNSDE
CCCCCHHCCCCEEEEEECCCCCCCCCEECCCEEEECCCCEEEEEEEECCCEEEEECCCC
YLEIEWENVKRIGAKTIILDVDSDMIKKTKL
EEEEEECCCCCCCCEEEEEECCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA