| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is dapG [H]
Identifier: 18310660
GI number: 18310660
Start: 1954579
End: 1955775
Strand: Reverse
Name: dapG [H]
Synonym: CPE1678
Alternate gene names: 18310660
Gene position: 1955775-1954579 (Counterclockwise)
Preceding gene: 18310661
Following gene: 18310659
Centisome position: 64.52
GC content: 30.91
Gene sequence:
>1197_bases TTGAAAATAGTAGTACAAAAATTTGGTGGTACTTCTGTATCAACAAAAGAAAGAAGAACTATGGTTGTAGAAAAGGTAAA AGGGGCAATAAATAAAGGATATTTACCAGTGGTTGTTGTATCTGCTATGGGAAGAAAAGGAGAACCTTATGCAACTGATA CACTTTTAGGATTAGTATCAGAAGAGTTTAAAAAAGAAAATAAATTAGCTACTGATTTACTTATGGGATGTGGAGAAATT ATAAGCACTGTTGTCATGAGTGATGAATTAAGAGAGGCAGAAATAGAAGCAGTTCCTTTAACAGGAGGAAATGCAGGAAT ACTTACAGATGATAATTATTCAAGTGCTGATTTTATAGATATAAATCCTAAATTAATATTAGAAGTTCTTAAAGAAGGAA AAGTGCCTGTTGTTGCTGGGTTCCAAGGAGTTGATAGAAATGGATTCTTAACTACTTTAGGAAGAGGCGGAAGTGATACT ACGGCAGCGGTTTTAGGGGTAGCATTAAAGGCTGAAGAAATTGAAATATATACAGATGTTGATGGAATAATGACTGCTGA CCCAAGAATAGTTGGAGATGCTGAGCTTATAAATAAAATAAGTTATAATGAAGTATTCCAATTAGCAGATCAAGGGGCTA AGGTAATTCATCCAAGAGCTGTAGAAATAGCAATGAAAGGAAATGTAACCTTAGTAATAAAGAATACTATGAGTACTTGC ATTGGTACAATGATAGATAGTCTAGGGGATGTAGATAATAATAAGTTCATAACTGGAATAACTCATCAAGGAAATAGAAT TCAAGTTTCTATAAAATCTGATGACAATAAAGATAATATAAATTATAAGACTATTTTGGAAAGCCTTGCAAATAATAAAA TAAGTTTAGACTTAATTAATATCTTCCCTAAAGAAAAAGTATTTACAATAGATGCAGGTGTTAAAGAATTATTTGAAGAT ATTATGAGAAAAAATAATTTAAAATATAGTTTAGTAGAAGATTTAAGCACTATAGCTATAGTTGGTTCAAGAATGAGAGG AATTCCAGGAGTTATGGCTAAAATAGTAGGTGCTTTAGACAATGAAAACATAGAAGTTTTACAAACAGCAGATTCACATA TGACAATTTGGTGTCTTGTTGAAAGTAAAAATGTAAGAGAAGCTATAAAAGCACTTCATAGAGTCTTTATGAAATAA
Upstream 100 bases:
>100_bases ATCGAGTGGGAAAATGTAAAAAGAATAGGAGCTAAAACCATAATATTAGATGTAGATAGTGATATGATAAAAAAAACTAA GCTGTAGGAGTGTGGGGATT
Downstream 100 bases:
>100_bases TGTATATAAATTTCCTTTCTGTACAAAATAATTTTAGTACAGGAGGGATATATATGGAACATAACAAAGAAAATGAAAAT AAAAGTATAGAAGAAATAAA
Product: aspartate kinase I
Products: NA
Alternate protein names: Aspartate kinase 1; Aspartokinase I [H]
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKIVVQKFGGTSVSTKERRTMVVEKVKGAINKGYLPVVVVSAMGRKGEPYATDTLLGLVSEEFKKENKLATDLLMGCGEI ISTVVMSDELREAEIEAVPLTGGNAGILTDDNYSSADFIDINPKLILEVLKEGKVPVVAGFQGVDRNGFLTTLGRGGSDT TAAVLGVALKAEEIEIYTDVDGIMTADPRIVGDAELINKISYNEVFQLADQGAKVIHPRAVEIAMKGNVTLVIKNTMSTC IGTMIDSLGDVDNNKFITGITHQGNRIQVSIKSDDNKDNINYKTILESLANNKISLDLINIFPKEKVFTIDAGVKELFED IMRKNNLKYSLVEDLSTIAIVGSRMRGIPGVMAKIVGALDNENIEVLQTADSHMTIWCLVESKNVREAIKALHRVFMK
Sequences:
>Translated_398_residues MKIVVQKFGGTSVSTKERRTMVVEKVKGAINKGYLPVVVVSAMGRKGEPYATDTLLGLVSEEFKKENKLATDLLMGCGEI ISTVVMSDELREAEIEAVPLTGGNAGILTDDNYSSADFIDINPKLILEVLKEGKVPVVAGFQGVDRNGFLTTLGRGGSDT TAAVLGVALKAEEIEIYTDVDGIMTADPRIVGDAELINKISYNEVFQLADQGAKVIHPRAVEIAMKGNVTLVIKNTMSTC IGTMIDSLGDVDNNKFITGITHQGNRIQVSIKSDDNKDNINYKTILESLANNKISLDLINIFPKEKVFTIDAGVKELFED IMRKNNLKYSLVEDLSTIAIVGSRMRGIPGVMAKIVGALDNENIEVLQTADSHMTIWCLVESKNVREAIKALHRVFMK >Mature_398_residues MKIVVQKFGGTSVSTKERRTMVVEKVKGAINKGYLPVVVVSAMGRKGEPYATDTLLGLVSEEFKKENKLATDLLMGCGEI ISTVVMSDELREAEIEAVPLTGGNAGILTDDNYSSADFIDINPKLILEVLKEGKVPVVAGFQGVDRNGFLTTLGRGGSDT TAAVLGVALKAEEIEIYTDVDGIMTADPRIVGDAELINKISYNEVFQLADQGAKVIHPRAVEIAMKGNVTLVIKNTMSTC IGTMIDSLGDVDNNKFITGITHQGNRIQVSIKSDDNKDNINYKTILESLANNKISLDLINIFPKEKVFTIDAGVKELFED IMRKNNLKYSLVEDLSTIAIVGSRMRGIPGVMAKIVGALDNENIEVLQTADSHMTIWCLVESKNVREAIKALHRVFMK
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartokinase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=460, Percent_Identity=26.7391304347826, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI1790455, Length=339, Percent_Identity=28.3185840707965, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320893, Length=364, Percent_Identity=26.6483516483516, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 43325; Mature: 43325
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVVQKFGGTSVSTKERRTMVVEKVKGAINKGYLPVVVVSAMGRKGEPYATDTLLGLVS CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHH EEFKKENKLATDLLMGCGEIISTVVMSDELREAEIEAVPLTGGNAGILTDDNYSSADFID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCEEE INPKLILEVLKEGKVPVVAGFQGVDRNGFLTTLGRGGSDTTAAVLGVALKAEEIEIYTDV CCHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHEEECEEEEEECC DGIMTADPRIVGDAELINKISYNEVFQLADQGAKVIHPRAVEIAMKGNVTLVIKNTMSTC CCEEECCCCEECCHHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCEEEEECCHHHHH IGTMIDSLGDVDNNKFITGITHQGNRIQVSIKSDDNKDNINYKTILESLANNKISLDLIN HHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEE IFPKEKVFTIDAGVKELFEDIMRKNNLKYSLVEDLSTIAIVGSRMRGIPGVMAKIVGALD ECCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC NENIEVLQTADSHMTIWCLVESKNVREAIKALHRVFMK CCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MKIVVQKFGGTSVSTKERRTMVVEKVKGAINKGYLPVVVVSAMGRKGEPYATDTLLGLVS CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHH EEFKKENKLATDLLMGCGEIISTVVMSDELREAEIEAVPLTGGNAGILTDDNYSSADFID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCEEE INPKLILEVLKEGKVPVVAGFQGVDRNGFLTTLGRGGSDTTAAVLGVALKAEEIEIYTDV CCHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHEEECEEEEEECC DGIMTADPRIVGDAELINKISYNEVFQLADQGAKVIHPRAVEIAMKGNVTLVIKNTMSTC CCEEECCCCEECCHHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCEEEEECCHHHHH IGTMIDSLGDVDNNKFITGITHQGNRIQVSIKSDDNKDNINYKTILESLANNKISLDLIN HHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEE IFPKEKVFTIDAGVKELFEDIMRKNNLKYSLVEDLSTIAIVGSRMRGIPGVMAKIVGALD ECCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC NENIEVLQTADSHMTIWCLVESKNVREAIKALHRVFMK CCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]