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The map label for this gene is recA

Identifier: 18310655

GI number: 18310655

Start: 1948140

End: 1949198

Strand: Reverse

Name: recA

Synonym: CPE1673

Alternate gene names: 18310655

Gene position: 1949198-1948140 (Counterclockwise)

Preceding gene: 18310656

Following gene: 18310654

Centisome position: 64.3

GC content: 34.56

Gene sequence:

>1059_bases
ATGGCAAATATAGATAAAGATAAATTAAAAGCTATTGAGATGGCTATGGGTCAAATAGAGAAGCAATTTGGAAAGGGATC
AGTAATGAAACTTGGAGAGCAAGGAGCTCCTCAAATGGATGCTGTTTCTACTGGATGCTTAGATCTTGATATAGCTTTAG
GAATTGGTGGAGTACCAAAAGGAAGAATTATTGAGATATATGGACCAGAGAGTTCTGGTAAAACAACAGTGGCTTTACAT
GTAGTAGCAGAGGCACAAAAATTAGGTGGAGCAGCAGCGTATATAGATGCAGAGCATGCTTTAGATCCAGTTTATGCAAA
AAGATTAGGTGTTAATATAGATGATTTAGTAGTTTCACAACCAGATACAGGAGAACAAGCTTTAGAAATAACAGAAGCTT
TAGTTAGATCAGGAGCTATAGATGTTTTAGTTGTGGACTCAGTTGCCGCTTTAGTTCCAAGAGCAGAAATTGAAGGTGAA
ATGGGAGATTCTCACGTTGGTCTTCAAGCTAGATTAATGTCACAAGCCTTAAGAAAGTTAACAGGAACAATTAACAAATC
AAACTGCGTAGTAATATTCATAAACCAATTAAGAGAAAAAGTTGGTATAATGTTTGGTAATCCAGAGACAACACCAGGTG
GTAGAGCGTTAAAATTCTATGCTTCAGTTAGAATGGATATAAGAAGAATAGATTCAATAAAACAAGGTGACGGAATAACT
GGTAATAGAACAAGAGTTAAAATAGTTAAGAATAAGGTTGCTCCTCCATTTAAGCAAGCTGAATTTGATATAATGTACAA
TGAAGGTATATCAAAAGAAGGTAATATAGTAGACGTTGGAGTAAAAGAAAATATAGTACAAAAGAGTGGAGCTTGGTTCT
CATATGGAGATATAAGATTAGGCCAAGGTAGAGAAAATGCTAAACAATATTTAAAAGAGAATCCAGCAGTTGCTTTAGAT
ATAGAAAATCAAATAAGAGAAAAATATTCTCTTCCTTTAGCTAAGGCTGTTGAATCAACAAGTGTAGAAGAAAATACAGA
AGAGTCTGTTGAAAGCTAA

Upstream 100 bases:

>100_bases
CATGAGGTTCTTTTAAGAACTTCATGTTGATGTTGACTTTTTTTTTGTATATATTATAATAATAGTAGAACTTATGTTCG
GTTATTTAAGGAGGTTACGT

Downstream 100 bases:

>100_bases
TAAAAAAGATAAGGATTTCCTTATCTTTTTTTTATAATTTTATCACTTCTTAATAATTTTAATGTATGAATTTAAAGTTT
TATGAATATGTTAACATTAA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MANIDKDKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGPESSGKTTVALH
VVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALEITEALVRSGAIDVLVVDSVAALVPRAEIEGE
MGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIKQGDGIT
GNRTRVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGRENAKQYLKENPAVALD
IENQIREKYSLPLAKAVESTSVEENTEESVES

Sequences:

>Translated_352_residues
MANIDKDKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGPESSGKTTVALH
VVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALEITEALVRSGAIDVLVVDSVAALVPRAEIEGE
MGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIKQGDGIT
GNRTRVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGRENAKQYLKENPAVALD
IENQIREKYSLPLAKAVESTSVEENTEESVES
>Mature_351_residues
ANIDKDKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGPESSGKTTVALHV
VAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEM
GDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIKQGDGITG
NRTRVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGRENAKQYLKENPAVALDI
ENQIREKYSLPLAKAVESTSVEENTEESVES

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=324, Percent_Identity=64.5061728395062, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CLOP1 (Q0TPT0)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696360.1
- ProteinModelPortal:   Q0TPT0
- SMR:   Q0TPT0
- STRING:   Q0TPT0
- GeneID:   4203515
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_1927
- TIGR:   CPF_1927
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   CPER195103:CPF_1927-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37956; Mature: 37825

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANIDKDKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPK
CCCCCHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCHHHHCCCCEEEEEEECCCCCCC
GRIIEIYGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQ
CCEEEEECCCCCCCEEEEEEEEEHHHHCCCEEEEEEHHHCCCHHHHHHHCCCHHHEEECC
PDTGEQALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKL
CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
TGTINKSNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIKQGDGIT
HCCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHCHHCCCCCC
GNRTRVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRL
CCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCHHHHHHHCCCEEEECCEEE
GQGRENAKQYLKENPAVALDIENQIREKYSLPLAKAVESTSVEENTEESVES
CCCHHHHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure 
ANIDKDKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPK
CCCCHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCHHHHCCCCEEEEEEECCCCCCC
GRIIEIYGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQ
CCEEEEECCCCCCCEEEEEEEEEHHHHCCCEEEEEEHHHCCCHHHHHHHCCCHHHEEECC
PDTGEQALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKL
CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
TGTINKSNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIKQGDGIT
HCCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEHHHHHHHHHHHHCHHCCCCCC
GNRTRVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRL
CCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCHHHHHHHCCCEEEECCEEE
GQGRENAKQYLKENPAVALDIENQIREKYSLPLAKAVESTSVEENTEESVES
CCCHHHHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA