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The map label for this gene is asnC [H]

Identifier: 18310636

GI number: 18310636

Start: 1926770

End: 1927240

Strand: Direct

Name: asnC [H]

Synonym: CPE1654

Alternate gene names: 18310636

Gene position: 1926770-1927240 (Clockwise)

Preceding gene: 18310634

Following gene: 18310637

Centisome position: 63.56

GC content: 28.66

Gene sequence:

>471_bases
ATGTCTTTAATAAACACATCAACTCATTTAGATGAATTAGATTTACAAATTTTAGATATCCTAATTAAAGATTGCAGAAC
TCCTTACTTAGAGATAGCAAGAATATGCCACGTTTCAGGTGGTACAATCCATGTTAGAATGAAAAAGATGGAAGACTTAG
GAATTATAAAAGGTACTAGAATACTTTTAAATTTACCTAAATTAGGCTATGATGTTACATGCTTCGTTGGTATTCATGTT
AACTCAACTTCATCATACACTCATGTTTTTGATGAACTTTCAAAAATTAAAGAAGTAGTTGAAATTCATTTAATAACTGG
GGGTTATGCTATTTTTGCTAAGGTTATTTGCAAGAGCATATCAGATCTTCAAGATATTTTAATGAACAAAATTAATCATA
TTGAAGGAATAAGCGGAACTGATACATTTATATCTCTATCTCAACCAATAGATAGAAATATAACCCTTTAA

Upstream 100 bases:

>100_bases
AAAAATATATTTGTGATTTTCAAAAGTATATATAGTATTTCTATAAAAAATTTGATAAAATAGAATTATCATTTTATTCA
AATTTTAAAGAGGTGATACT

Downstream 100 bases:

>100_bases
AAAAGAAATAGCTTAAGCTATTTCTTTTTTTTATATTTTTAACTATGAATAAAATACAAATTTCTACTAATAATATTAAC
ATATCTTAGAAAAGGATGTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSLINTSTHLDELDLQILDILIKDCRTPYLEIARICHVSGGTIHVRMKKMEDLGIIKGTRILLNLPKLGYDVTCFVGIHV
NSTSSYTHVFDELSKIKEVVEIHLITGGYAIFAKVICKSISDLQDILMNKINHIEGISGTDTFISLSQPIDRNITL

Sequences:

>Translated_156_residues
MSLINTSTHLDELDLQILDILIKDCRTPYLEIARICHVSGGTIHVRMKKMEDLGIIKGTRILLNLPKLGYDVTCFVGIHV
NSTSSYTHVFDELSKIKEVVEIHLITGGYAIFAKVICKSISDLQDILMNKINHIEGISGTDTFISLSQPIDRNITL
>Mature_155_residues
SLINTSTHLDELDLQILDILIKDCRTPYLEIARICHVSGGTIHVRMKKMEDLGIIKGTRILLNLPKLGYDVTCFVGIHVN
STSSYTHVFDELSKIKEVVEIHLITGGYAIFAKVICKSISDLQDILMNKINHIEGISGTDTFISLSQPIDRNITL

Specific function: Activator of asnA transcription [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=145, Percent_Identity=46.8965517241379, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17437; Mature: 17306

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLINTSTHLDELDLQILDILIKDCRTPYLEIARICHVSGGTIHVRMKKMEDLGIIKGTR
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCE
ILLNLPKLGYDVTCFVGIHVNSTSSYTHVFDELSKIKEVVEIHLITGGYAIFAKVICKSI
EEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHH
SDLQDILMNKINHIEGISGTDTFISLSQPIDRNITL
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
SLINTSTHLDELDLQILDILIKDCRTPYLEIARICHVSGGTIHVRMKKMEDLGIIKGTR
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCE
ILLNLPKLGYDVTCFVGIHVNSTSSYTHVFDELSKIKEVVEIHLITGGYAIFAKVICKSI
EEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHH
SDLQDILMNKINHIEGISGTDTFISLSQPIDRNITL
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]