| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310634
Identifier: 18310634
GI number: 18310634
Start: 1925171
End: 1926172
Strand: Direct
Name: 18310634
Synonym: CPE1652
Alternate gene names: NA
Gene position: 1925171-1926172 (Clockwise)
Preceding gene: 18310630
Following gene: 18310636
Centisome position: 63.51
GC content: 26.75
Gene sequence:
>1002_bases ATGGATAAAAAATCTATACCCTTTGATAAGCTTAAGTTTTACTATGGAATTCCCCATTCCCATACATCCTTATCAACAGG AAAAAGTAGTCCTTATGAATCCTTAGAACATGCTCGCTCTAATGGATTAGATTTTTTAATAATTACTGATCATAATAAAT ATTTAAGCGAAACTATCAAAGAAAAAAATAAAGAAATTTCAAAATGGGAGTATTTAAATAAGTGCATAAATAAATTTAAT AAAAAACATTCTGATTTTTTAGCCTTATGTGGTTTTGAAGCTAAATCAACAACCTTAGGTCACTTAAATATCCTATGTCC TAATACATTTTTTACTGGAATAATTCCAGACATTAAATATCTATTACTTTGGCTCATTAATGATCACACAGCCTTACTTA GTATTAATCATCCTAAAAATTCCATAGCTAAAAAATTTGAATTTACGCCTATTTTAGATAAACTTTTATGTTCTATAGAG GTTGGAAATGGAATTCCACCTAGTACTTATACAAGATATGACTCTCAATTTTTCTCCCTTTTAGATAAGGGATTTAAACT AGGAGCTATAAATTCCCAAGACAATCACAAATTAAATCAAGGAGATAGCGAAAATTTAACCTGCGTAATTTCACATAAAT TAAATAAAAACTCCTTACTTGATGCATTTAAAAATAGACATATATTTTCAACGGAATCAAAAACTTTAAAAATGCTATTT TCTTTAAATTCAACCTTTATGGGGGGAACAATAACTGTAGATTCCTCTTCAAAAATTAGTCTCTATTTACAAGTTGAAGA TCATATAAACAAAATATCTAAAGTTCAATTTTTAACTAACCAGGGAAAAATCATTAAAGAAATTAAAGATATAGATTTGC ATAATGTTAAATATATTTTTGAAAAGGAAGTTTCTTTAAATGAAACTTGGTTTGTAGCTAAAGTTTATTTAAATAACAAT AAAGAGGCCATGTCCTCTCCAATCTTTGTTAATTATGAATAA
Upstream 100 bases:
>100_bases ATATACTTAAAAAATCATATATAAAAATAATAAATAAAACACATTTAATCTAAATATTATAAATATTATATACTATACTA ATATTTATAAAGAGGTATTA
Downstream 100 bases:
>100_bases AAAAACAAACTCCATTAATAATGGAGTTTATTTTTTTGAATCCTTATTATGTTTAACTCTATTTGGTTTTGCCTTTGGTT TAATAACAACTTTTTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: PHP Domain Protein; Metallophosphoesterase; PHP C-Terminal Domain Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Ig Domain Domain Protein; Ig Domain Protein
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIKEKNKEISKWEYLNKCINKFN KKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKYLLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIE VGNGIPPSTYTRYDSQFFSLLDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIFEKEVSLNETWFVAKVYLNNN KEAMSSPIFVNYE
Sequences:
>Translated_333_residues MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIKEKNKEISKWEYLNKCINKFN KKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKYLLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIE VGNGIPPSTYTRYDSQFFSLLDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIFEKEVSLNETWFVAKVYLNNN KEAMSSPIFVNYE >Mature_333_residues MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIKEKNKEISKWEYLNKCINKFN KKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKYLLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIE VGNGIPPSTYTRYDSQFFSLLDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIFEKEVSLNETWFVAKVYLNNN KEAMSSPIFVNYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38111; Mature: 38111
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIK CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH EKNKEISKWEYLNKCINKFNKKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKY HHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHH LLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIEVGNGIPPSTYTRYDSQFFSL HHHHEECCCEEEEEECCCHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH LDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF HHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEECCHHHHHHHH SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIF HHCCCCCCCEEEECCCCEEEEEEEEHHHHCHHHHHEEECCCCHHHHHHHCCCCCCEEEEE EKEVSLNETWFVAKVYLNNNKEAMSSPIFVNYE ECCCCCCCEEEEEEEEECCCHHHHCCCEEEEEC >Mature Secondary Structure MDKKSIPFDKLKFYYGIPHSHTSLSTGKSSPYESLEHARSNGLDFLIITDHNKYLSETIK CCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHH EKNKEISKWEYLNKCINKFNKKHSDFLALCGFEAKSTTLGHLNILCPNTFFTGIIPDIKY HHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHH LLLWLINDHTALLSINHPKNSIAKKFEFTPILDKLLCSIEVGNGIPPSTYTRYDSQFFSL HHHHEECCCEEEEEECCCHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH LDKGFKLGAINSQDNHKLNQGDSENLTCVISHKLNKNSLLDAFKNRHIFSTESKTLKMLF HHCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEECCHHHHHHHH SLNSTFMGGTITVDSSSKISLYLQVEDHINKISKVQFLTNQGKIIKEIKDIDLHNVKYIF HHCCCCCCCEEEECCCCEEEEEEEEHHHHCHHHHHEEECCCCHHHHHHHCCCCCCEEEEE EKEVSLNETWFVAKVYLNNNKEAMSSPIFVNYE ECCCCCCCEEEEEEEEECCCHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA