| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310598
Identifier: 18310598
GI number: 18310598
Start: 1886074
End: 1886262
Strand: Direct
Name: 18310598
Synonym: CPE1616
Alternate gene names: NA
Gene position: 1886074-1886262 (Clockwise)
Preceding gene: 18310594
Following gene: 18310602
Centisome position: 62.22
GC content: 28.57
Gene sequence:
>189_bases ATGAGTAAATCTGCTTGGGACTATACCTTAGAAATTCTATCCTTAATGGGTGACATTGATTATTACAATGATTTGTTAAG TAAAAATCTTAACAAGAAAGAGCGAGAAGTGTATTCTAAAAAAGTAGACGCACTAGAAAGTAAGTTCTTCTCTTTAAAAG AAAAGCTAAAAAACACATCAATTTTTTAA
Upstream 100 bases:
>100_bases CATGGACTAAAATATATTAAAGTAATTAATTAAAATTATTCACCAAATCTTCTATTAATATCTATACTATTACTAGATTT TAAACTTAGGAGGTTTTTTT
Downstream 100 bases:
>100_bases TGAAAAAAAGGTCCAACAAAAGTTGAACCTTTAAACAAACTCAATTAATGTTCCCAAATATGCCGTCACACTTACAATTT TATACCTGCCTCTCGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSKSAWDYTLEILSLMGDIDYYNDLLSKNLNKKEREVYSKKVDALESKFFSLKEKLKNTSIF
Sequences:
>Translated_62_residues MSKSAWDYTLEILSLMGDIDYYNDLLSKNLNKKEREVYSKKVDALESKFFSLKEKLKNTSIF >Mature_61_residues SKSAWDYTLEILSLMGDIDYYNDLLSKNLNKKEREVYSKKVDALESKFFSLKEKLKNTSIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7330; Mature: 7199
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSAWDYTLEILSLMGDIDYYNDLLSKNLNKKEREVYSKKVDALESKFFSLKEKLKNTS CCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IF CC >Mature Secondary Structure SKSAWDYTLEILSLMGDIDYYNDLLSKNLNKKEREVYSKKVDALESKFFSLKEKLKNTS CCCHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA