| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310595
Identifier: 18310595
GI number: 18310595
Start: 1883647
End: 1884012
Strand: Reverse
Name: 18310595
Synonym: CPE1613
Alternate gene names: NA
Gene position: 1884012-1883647 (Counterclockwise)
Preceding gene: 18310596
Following gene: 18310593
Centisome position: 62.15
GC content: 23.5
Gene sequence:
>366_bases GTGAAAGCTTTAATTTTAGTAGGAATAATATTATTTGCTGTAGGATTATTATTTGAGTCAATGTATAAAATAAAAATGGT ATTTAAGAGTTTTTCTAAAGATACTAATGGGAAGGCAGGAAAGGATTTTAATTTTGACTTTAAAAATCAGTTTAATAATA TATCAGAAGAAAAGAGAGAAGAGTTTATAAGATCCTTATCAGATGATAAGAAGGGTTTATTTAAAGAATACTTAGCTTGT AATAAAGAAGATGAAAATTTATTAAGAGAAAAATTAGATGAAAAACATGTGTTTAATATGTTTAACAGATGGGCAAGACA AAATAATATAGAACCAATAAACATAAGTAACTATAAAGATTTATAA
Upstream 100 bases:
>100_bases TACAAAGAAAACTATGATAGAATTTCTTTGGAGTTAAATTTTAATATGCTCCTTTTTACTTAATATAGTTTAAATAAAAA TTTAGTTTGGAGATGATTAG
Downstream 100 bases:
>100_bases AAGGTTTTTACAAATATAAAAATAGTCCTAGGAAGAAAAATCCTTGGACTATTTTTATTTTTAAAGATTTAATTACCTTT TGCTAAATGCTTATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKALILVGIILFAVGLLFESMYKIKMVFKSFSKDTNGKAGKDFNFDFKNQFNNISEEKREEFIRSLSDDKKGLFKEYLAC NKEDENLLREKLDEKHVFNMFNRWARQNNIEPINISNYKDL
Sequences:
>Translated_121_residues MKALILVGIILFAVGLLFESMYKIKMVFKSFSKDTNGKAGKDFNFDFKNQFNNISEEKREEFIRSLSDDKKGLFKEYLAC NKEDENLLREKLDEKHVFNMFNRWARQNNIEPINISNYKDL >Mature_121_residues MKALILVGIILFAVGLLFESMYKIKMVFKSFSKDTNGKAGKDFNFDFKNQFNNISEEKREEFIRSLSDDKKGLFKEYLAC NKEDENLLREKLDEKHVFNMFNRWARQNNIEPINISNYKDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14359; Mature: 14359
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALILVGIILFAVGLLFESMYKIKMVFKSFSKDTNGKAGKDFNFDFKNQFNNISEEKRE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHH EFIRSLSDDKKGLFKEYLACNKEDENLLREKLDEKHVFNMFNRWARQNNIEPINISNYKD HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC L C >Mature Secondary Structure MKALILVGIILFAVGLLFESMYKIKMVFKSFSKDTNGKAGKDFNFDFKNQFNNISEEKRE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHH EFIRSLSDDKKGLFKEYLACNKEDENLLREKLDEKHVFNMFNRWARQNNIEPINISNYKD HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA