Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310593

Identifier: 18310593

GI number: 18310593

Start: 1882553

End: 1882822

Strand: Reverse

Name: 18310593

Synonym: CPE1611

Alternate gene names: NA

Gene position: 1882822-1882553 (Counterclockwise)

Preceding gene: 18310595

Following gene: 18310592

Centisome position: 62.11

GC content: 21.85

Gene sequence:

>270_bases
ATGATAAATAGAGATTTTATTATAAGCTTTATTGTTGTAACTTGTATTATATATCTTATATATGTATGTTACGGCAAATA
CTTAGAGAAAAAGCAAATATATCTTAAAACTTTAACTATATTTTTAATAATAGAAGTCTTAAGAAGGATTTTTATTTATG
GAAAAGTCAACAATCGTTTAATAAGTGGACTTTCTTTTATTCAATTGATATTTTTAGGAATTTCAGTAGCTATGTATGGA
CTTATGTATTTTAAGAATAATTTAAGCTGA

Upstream 100 bases:

>100_bases
TTAAACCATCCTTTATATTTATTCAGCAATTTTTATTGTAAAATAAAAATATAGAATTGTAAAATTAAATAAAAATATAG
TTTTAGTGAGGGGGGATAGG

Downstream 100 bases:

>100_bases
TAAATTTAATTAATCATAAGAATAAACTTTAGTAATTTATCTTAATAGAGTTTATTCTTATTTTTTATTAGAAAATATAC
TTTCATTTGATATATAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MINRDFIISFIVVTCIIYLIYVCYGKYLEKKQIYLKTLTIFLIIEVLRRIFIYGKVNNRLISGLSFIQLIFLGISVAMYG
LMYFKNNLS

Sequences:

>Translated_89_residues
MINRDFIISFIVVTCIIYLIYVCYGKYLEKKQIYLKTLTIFLIIEVLRRIFIYGKVNNRLISGLSFIQLIFLGISVAMYG
LMYFKNNLS
>Mature_89_residues
MINRDFIISFIVVTCIIYLIYVCYGKYLEKKQIYLKTLTIFLIIEVLRRIFIYGKVNNRLISGLSFIQLIFLGISVAMYG
LMYFKNNLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10519; Mature: 10519

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRDFIISFIVVTCIIYLIYVCYGKYLEKKQIYLKTLTIFLIIEVLRRIFIYGKVNNRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ISGLSFIQLIFLGISVAMYGLMYFKNNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINRDFIISFIVVTCIIYLIYVCYGKYLEKKQIYLKTLTIFLIIEVLRRIFIYGKVNNRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ISGLSFIQLIFLGISVAMYGLMYFKNNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA