| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yjjP [C]
Identifier: 18310572
GI number: 18310572
Start: 1864689
End: 1865459
Strand: Direct
Name: yjjP [C]
Synonym: CPE1590
Alternate gene names: 18310572
Gene position: 1864689-1865459 (Clockwise)
Preceding gene: 18310567
Following gene: 18310573
Centisome position: 61.51
GC content: 28.79
Gene sequence:
>771_bases ATGGATTTTAATAGAATTATCAATTTCTCAACTGAACTTGGTACTCTAATGCTTGAAAATGGCGCTGAAACATATAGAGT TGAAGAAACCATGAGCAGAATCTGTTTGGCTTATGGAATAGAAAAAGTTGATGTTTTTGTAATTCCTACAAACATAATAA TAACAATAAAAACATATAAAAATGCAATTTCTAGAACTAGAAGGGTAACAAGTAGAACTATTAATTTAGATAAAATAGCT AAATTAAACAACCTTTCAAGAGAGGTTGCCTTTAATAAAGTTTCTATTGAAGATGCTGAAAAAAAGCTAAGTAGTATAGC TGATGAAAAAGAATATCCTCTTAAAATAAAAATATTAGGATATTTAATTTCAGCTTCAACATTTACTCTACTTTTTGGAG GTAATTTAAAGGATTCTTTAGTCTCAGGTTTTATAGGAATAGTTCTTTGTCTTCTTGCATACTTTTTTAATATTTTAAAG ACAAACAATTTCTTTGTAAACATAATATCTGGAGCTTTGGCATCATTACTAGCTTTTCTTGCAGTAAGATTTAATATTGC TCCTAATCTAAATGAAATAATAATAGGTTCTTTAATGCCCTTAGTACCTGGACTTGCTATAACTAACTCACTTCGTGATA TAATAGCTGGTGATTTAGTTGCTGGAAGTGCTAAATTTATTGAAGCCTTTTTAATAGCTGTAGGTATTGCTATTGGAAGT GCTAGTATTTTATCTATATTAATAAATCACTATGGGGGTATGGCTATATGA
Upstream 100 bases:
>100_bases CTTTATAATAAACTCTTCTTCAAAGTATAATAGAAAAGAAATATTGTAATAATGAAAAAATGTTTCTTATTAATTTTTAC ATACTTATTTGGAGGTACAT
Downstream 100 bases:
>100_bases ACCTAATAATAAACTCAATATATGCATTTTTTAGTTCTTTAGGTTTTGGAATAATATTTAATATAAAAGGTAAAAACTTA TTTTTCTCTTCCCTATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDFNRIINFSTELGTLMLENGAETYRVEETMSRICLAYGIEKVDVFVIPTNIIITIKTYKNAISRTRRVTSRTINLDKIA KLNNLSREVAFNKVSIEDAEKKLSSIADEKEYPLKIKILGYLISASTFTLLFGGNLKDSLVSGFIGIVLCLLAYFFNILK TNNFFVNIISGALASLLAFLAVRFNIAPNLNEIIIGSLMPLVPGLAITNSLRDIIAGDLVAGSAKFIEAFLIAVGIAIGS ASILSILINHYGGMAI
Sequences:
>Translated_256_residues MDFNRIINFSTELGTLMLENGAETYRVEETMSRICLAYGIEKVDVFVIPTNIIITIKTYKNAISRTRRVTSRTINLDKIA KLNNLSREVAFNKVSIEDAEKKLSSIADEKEYPLKIKILGYLISASTFTLLFGGNLKDSLVSGFIGIVLCLLAYFFNILK TNNFFVNIISGALASLLAFLAVRFNIAPNLNEIIIGSLMPLVPGLAITNSLRDIIAGDLVAGSAKFIEAFLIAVGIAIGS ASILSILINHYGGMAI >Mature_256_residues MDFNRIINFSTELGTLMLENGAETYRVEETMSRICLAYGIEKVDVFVIPTNIIITIKTYKNAISRTRRVTSRTINLDKIA KLNNLSREVAFNKVSIEDAEKKLSSIADEKEYPLKIKILGYLISASTFTLLFGGNLKDSLVSGFIGIVLCLLAYFFNILK TNNFFVNIISGALASLLAFLAVRFNIAPNLNEIIIGSLMPLVPGLAITNSLRDIIAGDLVAGSAKFIEAFLIAVGIAIGS ASILSILINHYGGMAI
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082435, Length=245, Percent_Identity=21.6326530612245, Blast_Score=60, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27934; Mature: 27934
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNRIINFSTELGTLMLENGAETYRVEETMSRICLAYGIEKVDVFVIPTNIIITIKTYK CCCHHHEECCHHHHHEEECCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCEEEEEHHHH NAISRTRRVTSRTINLDKIAKLNNLSREVAFNKVSIEDAEKKLSSIADEKEYPLKIKILG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEHHH YLISASTFTLLFGGNLKDSLVSGFIGIVLCLLAYFFNILKTNNFFVNIISGALASLLAFL HHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVRFNIAPNLNEIIIGSLMPLVPGLAITNSLRDIIAGDLVAGSAKFIEAFLIAVGIAIGS HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ASILSILINHYGGMAI HHHHHHHHHHCCCCCC >Mature Secondary Structure MDFNRIINFSTELGTLMLENGAETYRVEETMSRICLAYGIEKVDVFVIPTNIIITIKTYK CCCHHHEECCHHHHHEEECCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCEEEEEHHHH NAISRTRRVTSRTINLDKIAKLNNLSREVAFNKVSIEDAEKKLSSIADEKEYPLKIKILG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEHHH YLISASTFTLLFGGNLKDSLVSGFIGIVLCLLAYFFNILKTNNFFVNIISGALASLLAFL HHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AVRFNIAPNLNEIIIGSLMPLVPGLAITNSLRDIIAGDLVAGSAKFIEAFLIAVGIAIGS HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ASILSILINHYGGMAI HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA