| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310573
Identifier: 18310573
GI number: 18310573
Start: 1865456
End: 1865947
Strand: Direct
Name: 18310573
Synonym: CPE1591
Alternate gene names: NA
Gene position: 1865456-1865947 (Clockwise)
Preceding gene: 18310572
Following gene: 18310579
Centisome position: 61.54
GC content: 28.05
Gene sequence:
>492_bases ATGAACCTAATAATAAACTCAATATATGCATTTTTTAGTTCTTTAGGTTTTGGAATAATATTTAATATAAAAGGTAAAAA CTTATTTTTCTCTTCCCTATGTGGCGGTTTAGGATGGTTTGTTTATCTTTTTTCCTCAAGCTTTATGAGCACAAATGAAA GCTTTAATTATTTTTTAGCTGCTATTTTCATAGCCCTATTCTCTGAGATTTCAGCTAGAGTATTAAAAGCTCCTGTATTA GTATTTTTAGTTTGTGGAATAATTCCTCTAGTTCCTGGAGGAGGCATGTTCTATACCATGCTAGAGACTTTAAAAGGAAA TATAGATAAAGCTTTATCCTTAGGATGCAATACACTAATGTTAGCTGGTTCCATAGCTACTGGAATTGTTTTAGTTTCAT CCTTTACTAAGCTATATTTTTCTATAAAAAGACTTATTAATAGTAAAATTAAAAGTACTGAAAATAATAACTATTTAAAT AAAAGTATTTAG
Upstream 100 bases:
>100_bases GTGCTAAATTTATTGAAGCCTTTTTAATAGCTGTAGGTATTGCTATTGGAAGTGCTAGTATTTTATCTATATTAATAAAT CACTATGGGGGTATGGCTAT
Downstream 100 bases:
>100_bases TTTTCTTAAAATGCTTTTATAGATACAATAAATCACATAAAAAGGAGTTATATCAAAAGTTAACAATAAAACTTATTTTG ATATAACTCCTTTTATGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine/Serine Exporter; Integral Membrane Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNLIINSIYAFFSSLGFGIIFNIKGKNLFFSSLCGGLGWFVYLFSSSFMSTNESFNYFLAAIFIALFSEISARVLKAPVL VFLVCGIIPLVPGGGMFYTMLETLKGNIDKALSLGCNTLMLAGSIATGIVLVSSFTKLYFSIKRLINSKIKSTENNNYLN KSI
Sequences:
>Translated_163_residues MNLIINSIYAFFSSLGFGIIFNIKGKNLFFSSLCGGLGWFVYLFSSSFMSTNESFNYFLAAIFIALFSEISARVLKAPVL VFLVCGIIPLVPGGGMFYTMLETLKGNIDKALSLGCNTLMLAGSIATGIVLVSSFTKLYFSIKRLINSKIKSTENNNYLN KSI >Mature_163_residues MNLIINSIYAFFSSLGFGIIFNIKGKNLFFSSLCGGLGWFVYLFSSSFMSTNESFNYFLAAIFIALFSEISARVLKAPVL VFLVCGIIPLVPGGGMFYTMLETLKGNIDKALSLGCNTLMLAGSIATGIVLVSSFTKLYFSIKRLINSKIKSTENNNYLN KSI
Specific function: Unknown
COG id: COG3610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17858; Mature: 17858
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIINSIYAFFSSLGFGIIFNIKGKNLFFSSLCGGLGWFVYLFSSSFMSTNESFNYFLA CCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIFIALFSEISARVLKAPVLVFLVCGIIPLVPGGGMFYTMLETLKGNIDKALSLGCNTLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCHHHH LAGSIATGIVLVSSFTKLYFSIKRLINSKIKSTENNNYLNKSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNLIINSIYAFFSSLGFGIIFNIKGKNLFFSSLCGGLGWFVYLFSSSFMSTNESFNYFLA CCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIFIALFSEISARVLKAPVLVFLVCGIIPLVPGGGMFYTMLETLKGNIDKALSLGCNTLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCHHHH LAGSIATGIVLVSSFTKLYFSIKRLINSKIKSTENNNYLNKSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA