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The map label for this gene is ycsE [H]

Identifier: 18310551

GI number: 18310551

Start: 1837666

End: 1838496

Strand: Reverse

Name: ycsE [H]

Synonym: CPE1569

Alternate gene names: 18310551

Gene position: 1838496-1837666 (Counterclockwise)

Preceding gene: 18310552

Following gene: 18310550

Centisome position: 60.65

GC content: 31.89

Gene sequence:

>831_bases
ATGAATTATAAATTAGTTTGTATAGATATGGATGGTACGCTTTTAGATTCTCATCATAAAGTTAGTGAAAGAAATAAAGA
GGCTTTAAAGAAAGCCATTGAAAAAGGAGTACATATTGCCATATCAACAGGAAGGGTTTTTCCGTCAGCTAGGATATATG
GGAATATAATAGGAGTAAATACACCATTAATCTGTTCAAATGGTTCATATATAAAGGACAAAAATACTGATGAGGTAATA
TTTAAATCTACACTAGACAGGGAAACTTACTTTAAAATATGTGATATTATAAACAAATATAAGTTTTTAGCTTATGTGGA
CTCTACTGATGGACTAATAGCAGATACAGATATTCCAGAGGATGATAGTCATAGGCTTATGAATAGCTGGGTAGATGAGG
AAGAAAAAATAAAATTCTACAAGTATGATGATTTAAGAGATGCTTATGATGAACATGGAGAAGATATATTAAAGTTCATA
ATAATAAAACAAGAAGGTGGACCTAATATAGAAGAAGCAAAGGAGGAATTTGAAGCTTTAGAAGGAGTAGATTTAGTTTA
TGCTTCTTGGGGTGGATGTATAGAGATCATGAAAAAAGGAACTTCAAAGGGAAGTGCAGTTAAAGCCCTTGCAGATAAAT
TAGGAATAAGCCTAGAAGAGGTAATATGCATTGGTGATAGTGGAAATGATGTATCTATGCTAGAAGAGGCAGGATTATCT
GTAGTAATGGGAAATGCACCAGACTTTATTAAGGAATATGGAGATTATATAACAGATACAAATGAAAATGATGGTGTTGC
TAAGGCTATAGAGAAGTTTATATTGGAATAA

Upstream 100 bases:

>100_bases
TAACATAGCTACTTTTATTTAAGGGCTGTATATTAAAATATTAAATCTTGATTAAAAAAGAAAGTCTATATAAAATTTAA
TTTAGAAAGGGGAGAATTAA

Downstream 100 bases:

>100_bases
TAGAAATAAAGGGTTTAATAAAAGAGAAATTTAGTTTGACATATTGTCTTTAAAGTTATTAAATATGTTTAGAGATAATA
ATAAAATGTGAATTGTTCAT

Product: HAD hydrolase, IIB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNYKLVCIDMDGTLLDSHHKVSERNKEALKKAIEKGVHIAISTGRVFPSARIYGNIIGVNTPLICSNGSYIKDKNTDEVI
FKSTLDRETYFKICDIINKYKFLAYVDSTDGLIADTDIPEDDSHRLMNSWVDEEEKIKFYKYDDLRDAYDEHGEDILKFI
IIKQEGGPNIEEAKEEFEALEGVDLVYASWGGCIEIMKKGTSKGSAVKALADKLGISLEEVICIGDSGNDVSMLEEAGLS
VVMGNAPDFIKEYGDYITDTNENDGVAKAIEKFILE

Sequences:

>Translated_276_residues
MNYKLVCIDMDGTLLDSHHKVSERNKEALKKAIEKGVHIAISTGRVFPSARIYGNIIGVNTPLICSNGSYIKDKNTDEVI
FKSTLDRETYFKICDIINKYKFLAYVDSTDGLIADTDIPEDDSHRLMNSWVDEEEKIKFYKYDDLRDAYDEHGEDILKFI
IIKQEGGPNIEEAKEEFEALEGVDLVYASWGGCIEIMKKGTSKGSAVKALADKLGISLEEVICIGDSGNDVSMLEEAGLS
VVMGNAPDFIKEYGDYITDTNENDGVAKAIEKFILE
>Mature_276_residues
MNYKLVCIDMDGTLLDSHHKVSERNKEALKKAIEKGVHIAISTGRVFPSARIYGNIIGVNTPLICSNGSYIKDKNTDEVI
FKSTLDRETYFKICDIINKYKFLAYVDSTDGLIADTDIPEDDSHRLMNSWVDEEEKIKFYKYDDLRDAYDEHGEDILKFI
IIKQEGGPNIEEAKEEFEALEGVDLVYASWGGCIEIMKKGTSKGSAVKALADKLGISLEEVICIGDSGNDVSMLEEAGLS
VVMGNAPDFIKEYGDYITDTNENDGVAKAIEKFILE

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=289, Percent_Identity=31.4878892733564, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786982, Length=280, Percent_Identity=27.1428571428571, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI48994981, Length=288, Percent_Identity=29.5138888888889, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081790, Length=289, Percent_Identity=23.1833910034602, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787043, Length=285, Percent_Identity=23.5087719298246, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30809; Mature: 30809

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKLVCIDMDGTLLDSHHKVSERNKEALKKAIEKGVHIAISTGRVFPSARIYGNIIGVN
CCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHEEEEEECC
TPLICSNGSYIKDKNTDEVIFKSTLDRETYFKICDIINKYKFLAYVDSTDGLIADTDIPE
CCEEECCCCEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCEEECCCCCC
DDSHRLMNSWVDEEEKIKFYKYDDLRDAYDEHGEDILKFIIIKQEGGPNIEEAKEEFEAL
CHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHH
EGVDLVYASWGGCIEIMKKGTSKGSAVKALADKLGISLEEVICIGDSGNDVSMLEEAGLS
CCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEHEEEECCCCCCHHHHHHCCCE
VVMGNAPDFIKEYGDYITDTNENDGVAKAIEKFILE
EEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNYKLVCIDMDGTLLDSHHKVSERNKEALKKAIEKGVHIAISTGRVFPSARIYGNIIGVN
CCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHEEEEEECC
TPLICSNGSYIKDKNTDEVIFKSTLDRETYFKICDIINKYKFLAYVDSTDGLIADTDIPE
CCEEECCCCEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCEEECCCCCC
DDSHRLMNSWVDEEEKIKFYKYDDLRDAYDEHGEDILKFIIIKQEGGPNIEEAKEEFEAL
CHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHH
EGVDLVYASWGGCIEIMKKGTSKGSAVKALADKLGISLEEVICIGDSGNDVSMLEEAGLS
CCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEHEEEECCCCCCHHHHHHCCCE
VVMGNAPDFIKEYGDYITDTNENDGVAKAIEKFILE
EEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]