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The map label for this gene is liaH [H]

Identifier: 18310552

GI number: 18310552

Start: 1838800

End: 1839513

Strand: Reverse

Name: liaH [H]

Synonym: CPE1570

Alternate gene names: 18310552

Gene position: 1839513-1838800 (Counterclockwise)

Preceding gene: 18310553

Following gene: 18310551

Centisome position: 60.68

GC content: 27.59

Gene sequence:

>714_bases
ATGGGAATATTTAATAGAATATCAAATATGATTAAGGCTAAGACTAACTCAGCTTTAGATGAAATGGAGAATCCAGTAGA
ATTATTAGATCAAAAAATAAGAGATATGGAGAAATCTTTTAATGAAGGTAAAAGATCATCAGCTCAAATTTTTGGTAACT
TAAAAGATACTGAAAAGAAAATGAATGAAGCTAAGGAAGAGTCAGCTCAGTATGATGAAAAAGTAAGATTAGCAATGAGC
AAAGGAAATGAAGAGTTAGCTAAGAAAGCTTTAAAACTTAAATTAGATAGTGATAAGAAATTTGAGTCTTTAAAGGCAAG
CTATGAAGGACAAAGAGCTAAAGCTGATGTTCTAAAAGGAAAATTAGTGGAATTAGAAAAAGAATTAGATAAAACAAGAA
GTTATAGAGATGAAGCAGTAGCTAGACTTAATAATGCTGAAGCTTCAAAACAAATAAATGAAGTTATTGCAAATGTTCAA
AGTAAGAGTAATTCAATTAATATTGATGATATAGAAAGAAGTATTTCAAGAAAAGAGAGTTATGCTGCTGGATTAGAAGA
ATTAAAAGGTGAAAGCTTAGATGATGAATTTGCTAAATTAGAAGAATTAAGTTTAGACGATGAATTAAATAAGTATAGAA
CACAAAATACACAAGAAGATAAAACTTCAGATTCAGAGGTAGATTTAGAATTAGAGAAATATAAAAATAAATAA

Upstream 100 bases:

>100_bases
TAGAAAAAGAAGATAGTTAAAATTAATAATTATGACATGAATTTGTAAAAAAGAGAGAGTATAATAAATCTAAATAAAAA
GTCGTAAAGGTGGTAATAAA

Downstream 100 bases:

>100_bases
TATGTATTTTAAAGGGTTATACTAAAATAGCTCGTAAATAAAACTTATAAATATTGGGAAGAGAATATTTGAATGAACTT
AAATTTTTAGTGGAATTCAG

Product: phage shock protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGIFNRISNMIKAKTNSALDEMENPVELLDQKIRDMEKSFNEGKRSSAQIFGNLKDTEKKMNEAKEESAQYDEKVRLAMS
KGNEELAKKALKLKLDSDKKFESLKASYEGQRAKADVLKGKLVELEKELDKTRSYRDEAVARLNNAEASKQINEVIANVQ
SKSNSINIDDIERSISRKESYAAGLEELKGESLDDEFAKLEELSLDDELNKYRTQNTQEDKTSDSEVDLELEKYKNK

Sequences:

>Translated_237_residues
MGIFNRISNMIKAKTNSALDEMENPVELLDQKIRDMEKSFNEGKRSSAQIFGNLKDTEKKMNEAKEESAQYDEKVRLAMS
KGNEELAKKALKLKLDSDKKFESLKASYEGQRAKADVLKGKLVELEKELDKTRSYRDEAVARLNNAEASKQINEVIANVQ
SKSNSINIDDIERSISRKESYAAGLEELKGESLDDEFAKLEELSLDDELNKYRTQNTQEDKTSDSEVDLELEKYKNK
>Mature_236_residues
GIFNRISNMIKAKTNSALDEMENPVELLDQKIRDMEKSFNEGKRSSAQIFGNLKDTEKKMNEAKEESAQYDEKVRLAMSK
GNEELAKKALKLKLDSDKKFESLKASYEGQRAKADVLKGKLVELEKELDKTRSYRDEAVARLNNAEASKQINEVIANVQS
KSNSINIDDIERSISRKESYAAGLEELKGESLDDEFAKLEELSLDDELNKYRTQNTQEDKTSDSEVDLELEKYKNK

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 27060; Mature: 26929

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFNRISNMIKAKTNSALDEMENPVELLDQKIRDMEKSFNEGKRSSAQIFGNLKDTEKK
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH
MNEAKEESAQYDEKVRLAMSKGNEELAKKALKLKLDSDKKFESLKASYEGQRAKADVLKG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
KLVELEKELDKTRSYRDEAVARLNNAEASKQINEVIANVQSKSNSINIDDIERSISRKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YAAGLEELKGESLDDEFAKLEELSLDDELNKYRTQNTQEDKTSDSEVDLELEKYKNK
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GIFNRISNMIKAKTNSALDEMENPVELLDQKIRDMEKSFNEGKRSSAQIFGNLKDTEKK
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH
MNEAKEESAQYDEKVRLAMSKGNEELAKKALKLKLDSDKKFESLKASYEGQRAKADVLKG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
KLVELEKELDKTRSYRDEAVARLNNAEASKQINEVIANVQSKSNSINIDDIERSISRKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YAAGLEELKGESLDDEFAKLEELSLDDELNKYRTQNTQEDKTSDSEVDLELEKYKNK
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]