| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310550
Identifier: 18310550
GI number: 18310550
Start: 1837145
End: 1837549
Strand: Reverse
Name: 18310550
Synonym: CPE1568
Alternate gene names: NA
Gene position: 1837549-1837145 (Counterclockwise)
Preceding gene: 18310551
Following gene: 18310549
Centisome position: 60.62
GC content: 27.16
Gene sequence:
>405_bases ATGTTTAGTTTCACTTTTGATGAAAAAGAATATACTTTATCAGAGGATAAATTGCTTTATTTCTTTAATGAAGATGTTGA AGGTTTTGATATAGATAAGCTTTTTGAAATATTAAATAGTAGTGAGGGAGTTAGCTTTGGAAAAGCTTATTATGATGGCC CTTGTGAAGAATGTAAATTTGGATTAGAGGAAAAAAAGAAGAGCTTCCCATTTTTAGAGTTTAATATGTTTATTTATGCT AAGAATGGAAAGTTTGTAATAAGCAATATAGAAAAAGCTTATGAAGGTCTTACTTACAATAAATTATTAAGAGATAAAAA AGTAGACAAGAGCTATTTAGTTAATATAAATGTTTGTAAAAATTGTGGGAACTTCGCAGTTGAAGTTGAGGAACTTGAAG TATAA
Upstream 100 bases:
>100_bases AATAAAAGAGAAATTTAGTTTGACATATTGTCTTTAAAGTTATTAAATATGTTTAGAGATAATAATAAAATGTGAATTGT TCATAGAAAGGGATGATTAA
Downstream 100 bases:
>100_bases TAAAAAAGTTTTTGGTATGTATTCTTATAACACAAAAAAAGAATACATACCTTTTTTGTTTTAGGAAAATTTAATTATAT AGAAACAAATTAATAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFSFTFDEKEYTLSEDKLLYFFNEDVEGFDIDKLFEILNSSEGVSFGKAYYDGPCEECKFGLEEKKKSFPFLEFNMFIYA KNGKFVISNIEKAYEGLTYNKLLRDKKVDKSYLVNINVCKNCGNFAVEVEELEV
Sequences:
>Translated_134_residues MFSFTFDEKEYTLSEDKLLYFFNEDVEGFDIDKLFEILNSSEGVSFGKAYYDGPCEECKFGLEEKKKSFPFLEFNMFIYA KNGKFVISNIEKAYEGLTYNKLLRDKKVDKSYLVNINVCKNCGNFAVEVEELEV >Mature_134_residues MFSFTFDEKEYTLSEDKLLYFFNEDVEGFDIDKLFEILNSSEGVSFGKAYYDGPCEECKFGLEEKKKSFPFLEFNMFIYA KNGKFVISNIEKAYEGLTYNKLLRDKKVDKSYLVNINVCKNCGNFAVEVEELEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15663; Mature: 15663
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSFTFDEKEYTLSEDKLLYFFNEDVEGFDIDKLFEILNSSEGVSFGKAYYDGPCEECKF CCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCHHHHHC GLEEKKKSFPFLEFNMFIYAKNGKFVISNIEKAYEGLTYNKLLRDKKVDKSYLVNINVCK CHHHHHHCCCEEEEEEEEEECCCCEEEECHHHHHCCCHHHHHHHHCCCCCEEEEEEEEEC NCGNFAVEVEELEV CCCCEEEEEEEECC >Mature Secondary Structure MFSFTFDEKEYTLSEDKLLYFFNEDVEGFDIDKLFEILNSSEGVSFGKAYYDGPCEECKF CCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCHHHHHC GLEEKKKSFPFLEFNMFIYAKNGKFVISNIEKAYEGLTYNKLLRDKKVDKSYLVNINVCK CHHHHHHCCCEEEEEEEEEECCCCEEEECHHHHHCCCHHHHHHHHCCCCCEEEEEEEEEC NCGNFAVEVEELEV CCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA