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The map label for this gene is ydbT [H]

Identifier: 18310491

GI number: 18310491

Start: 1763959

End: 1765377

Strand: Reverse

Name: ydbT [H]

Synonym: CPE1509

Alternate gene names: 18310491

Gene position: 1765377-1763959 (Counterclockwise)

Preceding gene: 18310492

Following gene: 18310490

Centisome position: 58.24

GC content: 24.95

Gene sequence:

>1419_bases
ATGAATTTTTATAAAAAAAATCATTGGTGTAAAATTTTTATAACCTTTTTTAAGCTTATGAAAAATACTTGGCCAGTAAT
AATATTTTTAGCTTTGAAATTCAATGATTATATTGTGGAAATAACCTCTATTTCTATAGGGTTAATTTTAACTTTTTCTG
TGGTGAAATGGTTTAATACAAGTATTTTAATTGAAGAAAATTTTTTAATATACAGAGAAGGGGCTCTACTTAAGGAAGAA
ATGGTGATTCCCTTAAGGAGCATATCCTTAATAGAGCTTGAAAGAAATATAATCTATAGAATTTTTAAGCTTAGAAAGAT
AAAGATTGATAGTGTATATCCTTCTTCAAAGAAAAATGCAGAAATAATAATGGTATTAAAAAAGAAAGATTTAGAATCCC
TTTATGGAAACTTAAGTTATAGGATGAGGAATTTAATACATGATGAAAGAGAAATAAATCAAACCTTAGTCTATAACATA
TCAGCTGTTCATTTGATTTTACTTTCAATGCTTAGAAACAACATATTATTAGGAATAGGGGTTTTATATTCAAGCATACA
TTTTATGAGCAAGATATACAAGGGATTAAATCAAGAGTTAATCAGTTTTTTCAAGAATGTTATTGAGGAAAATGTAATAT
CTAGAGATACAATATTAGCAATATTTTTATCAGCACTTTTTTTATTTAGTATTTTATTATTAATAGTATTGATATTTTCT
GTCTTAGCAATATTATCTAAGTATTATAAGTTTACAATATATAGGAATAATAATTATTTAAAAGTTGAGTATGGCTTAAT
AACAAGAAGAAGTTATTCAATTCCAATGGAAAGCATACATGCAGTAAAAATAGAGCAAAATATTATAAATCAAATATTTA
AGTTCTATACTATAAAATGCTGTGTAGTTGGATATGGAAATAGTATTAAGGAAGATGAACTTATATTTCCTTTATGTAAT
GAAAAGGGATATAGAGATATATTAAAAAATCTTATTCCAGAGTTTATATTTGAAGGGGAAGTGTACAGGCCAGAAAAGAA
AGATTTAAGAAGATTTTTCACAATTCCAATACAAGTTGCGCTATATTCTAGTATAGGATTTTTTTTATTAACTAATGAGA
TATGGCCTCTTTTAATAAGCGTGCCTGTAGTTATTATTGAGAGAACTTTGCTATATAAAAATACTAAAATAGGTTTTGGA
AAGGATTTATATTATGTTAGCTATAAATCTCTTAATAGAAGACAAATTTTTATAAAAAGATCTAGTATGGAAGAAATAAG
AGTAACATCAAATCCACTTCAAATAAGAAAAAAGCTTGGTAATTTTAAGCTGAGATTTTATTCCCAAAAGAAACTTGATT
GGATTAAATTAAAAAACTTAAAATTAGAGATTTATGATGAACTAAAGAAATGGGCCTAA

Upstream 100 bases:

>100_bases
TATTTATACTGCCGGAGGGAAAGTTAGTATTCCAGCAATTAATAAGGAGCAGGTAGAATTTTTCAATTATATAGTTCAGG
AGAGAGTTTAGGGGTGAAAA

Downstream 100 bases:

>100_bases
TAAAAATATAGGATTTTATTTGTTAAGTAAATATATTTAAGGTAGTATATTATTAGAGATATTACATATATGTAGTATCA
TGAAAGGATGATTTTATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNFYKKNHWCKIFITFFKLMKNTWPVIIFLALKFNDYIVEITSISIGLILTFSVVKWFNTSILIEENFLIYREGALLKEE
MVIPLRSISLIELERNIIYRIFKLRKIKIDSVYPSSKKNAEIIMVLKKKDLESLYGNLSYRMRNLIHDEREINQTLVYNI
SAVHLILLSMLRNNILLGIGVLYSSIHFMSKIYKGLNQELISFFKNVIEENVISRDTILAIFLSALFLFSILLLIVLIFS
VLAILSKYYKFTIYRNNNYLKVEYGLITRRSYSIPMESIHAVKIEQNIINQIFKFYTIKCCVVGYGNSIKEDELIFPLCN
EKGYRDILKNLIPEFIFEGEVYRPEKKDLRRFFTIPIQVALYSSIGFFLLTNEIWPLLISVPVVIIERTLLYKNTKIGFG
KDLYYVSYKSLNRRQIFIKRSSMEEIRVTSNPLQIRKKLGNFKLRFYSQKKLDWIKLKNLKLEIYDELKKWA

Sequences:

>Translated_472_residues
MNFYKKNHWCKIFITFFKLMKNTWPVIIFLALKFNDYIVEITSISIGLILTFSVVKWFNTSILIEENFLIYREGALLKEE
MVIPLRSISLIELERNIIYRIFKLRKIKIDSVYPSSKKNAEIIMVLKKKDLESLYGNLSYRMRNLIHDEREINQTLVYNI
SAVHLILLSMLRNNILLGIGVLYSSIHFMSKIYKGLNQELISFFKNVIEENVISRDTILAIFLSALFLFSILLLIVLIFS
VLAILSKYYKFTIYRNNNYLKVEYGLITRRSYSIPMESIHAVKIEQNIINQIFKFYTIKCCVVGYGNSIKEDELIFPLCN
EKGYRDILKNLIPEFIFEGEVYRPEKKDLRRFFTIPIQVALYSSIGFFLLTNEIWPLLISVPVVIIERTLLYKNTKIGFG
KDLYYVSYKSLNRRQIFIKRSSMEEIRVTSNPLQIRKKLGNFKLRFYSQKKLDWIKLKNLKLEIYDELKKWA
>Mature_472_residues
MNFYKKNHWCKIFITFFKLMKNTWPVIIFLALKFNDYIVEITSISIGLILTFSVVKWFNTSILIEENFLIYREGALLKEE
MVIPLRSISLIELERNIIYRIFKLRKIKIDSVYPSSKKNAEIIMVLKKKDLESLYGNLSYRMRNLIHDEREINQTLVYNI
SAVHLILLSMLRNNILLGIGVLYSSIHFMSKIYKGLNQELISFFKNVIEENVISRDTILAIFLSALFLFSILLLIVLIFS
VLAILSKYYKFTIYRNNNYLKVEYGLITRRSYSIPMESIHAVKIEQNIINQIFKFYTIKCCVVGYGNSIKEDELIFPLCN
EKGYRDILKNLIPEFIFEGEVYRPEKKDLRRFFTIPIQVALYSSIGFFLLTNEIWPLLISVPVVIIERTLLYKNTKIGFG
KDLYYVSYKSLNRRQIFIKRSSMEEIRVTSNPLQIRKKLGNFKLRFYSQKKLDWIKLKNLKLEIYDELKKWA

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 56006; Mature: 56006

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYKKNHWCKIFITFFKLMKNTWPVIIFLALKFNDYIVEITSISIGLILTFSVVKWFNT
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHCC
SILIEENFLIYREGALLKEEMVIPLRSISLIELERNIIYRIFKLRKIKIDSVYPSSKKNA
EEEEECCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
EIIMVLKKKDLESLYGNLSYRMRNLIHDEREINQTLVYNISAVHLILLSMLRNNILLGIG
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHCCCEEHHH
VLYSSIHFMSKIYKGLNQELISFFKNVIEENVISRDTILAIFLSALFLFSILLLIVLIFS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAILSKYYKFTIYRNNNYLKVEYGLITRRSYSIPMESIHAVKIEQNIINQIFKFYTIKC
HHHHHHHHHEEEEEECCCEEEEEEEEEEECCCCCCHHHHHEEEHHHHHHHHHHHHHEEEE
CVVGYGNSIKEDELIFPLCNEKGYRDILKNLIPEFIFEGEVYRPEKKDLRRFFTIPIQVA
EEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEE
LYSSIGFFLLTNEIWPLLISVPVVIIERTLLYKNTKIGFGKDLYYVSYKSLNRRQIFIKR
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCEEEEEEE
SSMEEIRVTSNPLQIRKKLGNFKLRFYSQKKLDWIKLKNLKLEIYDELKKWA
CCCCCEEECCCHHHHHHHHCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MNFYKKNHWCKIFITFFKLMKNTWPVIIFLALKFNDYIVEITSISIGLILTFSVVKWFNT
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHCC
SILIEENFLIYREGALLKEEMVIPLRSISLIELERNIIYRIFKLRKIKIDSVYPSSKKNA
EEEEECCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
EIIMVLKKKDLESLYGNLSYRMRNLIHDEREINQTLVYNISAVHLILLSMLRNNILLGIG
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHCCCEEHHH
VLYSSIHFMSKIYKGLNQELISFFKNVIEENVISRDTILAIFLSALFLFSILLLIVLIFS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAILSKYYKFTIYRNNNYLKVEYGLITRRSYSIPMESIHAVKIEQNIINQIFKFYTIKC
HHHHHHHHHEEEEEECCCEEEEEEEEEEECCCCCCHHHHHEEEHHHHHHHHHHHHHEEEE
CVVGYGNSIKEDELIFPLCNEKGYRDILKNLIPEFIFEGEVYRPEKKDLRRFFTIPIQVA
EEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEE
LYSSIGFFLLTNEIWPLLISVPVVIIERTLLYKNTKIGFGKDLYYVSYKSLNRRQIFIKR
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCEEEEEEE
SSMEEIRVTSNPLQIRKKLGNFKLRFYSQKKLDWIKLKNLKLEIYDELKKWA
CCCCCEEECCCHHHHHHHHCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]