Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310492

Identifier: 18310492

GI number: 18310492

Start: 1765387

End: 1765854

Strand: Reverse

Name: 18310492

Synonym: CPE1510

Alternate gene names: NA

Gene position: 1765854-1765387 (Counterclockwise)

Preceding gene: 18310493

Following gene: 18310491

Centisome position: 58.25

GC content: 21.37

Gene sequence:

>468_bases
ATGAAATATAAATTAAGTAAATTATTTATTGTTAAATCTATTATTCTTAGATTTTTAATTTTTTCACTTTTATATTTAGG
TTTAAGCTTAGGATTTTATATATTAAAAAGTTTTAGTAGCTTTAACCAATTAAATGGAATTATGGATAATACTTTATGGG
TTTTACAATTATTAATTACAGTTATATTTATTATATCAGTATTAATATGTCCAATAATTAAGTATTTTACGTGGTCTTAT
TTTATATTTAGTGATTTTATTGAGATTAGATATGGAGTGTTATTTAAAAGGTATATATGTATAAAAAGGAATAATATAAA
ATACATAAATGTATGCGAAAATCCAATAGATATGATTTTAAGAATAAAGAGCATAAATATTTATACTGCCGGAGGGAAAG
TTAGTATTCCAGCAATTAATAAGGAGCAGGTAGAATTTTTCAATTATATAGTTCAGGAGAGAGTTTAG

Upstream 100 bases:

>100_bases
AGGGAATTAAACAAGATTTATAGATATTTATAGATTTTTGGCAACGGGTAGCCTATAAGAATGGTTTTCTTATAGGTTTT
TTTTATTAAAGGAGGAGTTA

Downstream 100 bases:

>100_bases
GGGTGAAAAATGAATTTTTATAAAAAAAATCATTGGTGTAAAATTTTTATAACCTTTTTTAAGCTTATGAAAAATACTTG
GCCAGTAATAATATTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLITVIFIISVLICPIIKYFTWSY
FIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMILRIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV

Sequences:

>Translated_155_residues
MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLITVIFIISVLICPIIKYFTWSY
FIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMILRIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV
>Mature_155_residues
MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLITVIFIISVLICPIIKYFTWSY
FIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMILRIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18327; Mature: 18327

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFIISVLICPIIKYFTWSYFIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH
RIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV
HHHHCEEEECCCEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFIISVLICPIIKYFTWSYFIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH
RIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV
HHHHCEEEECCCEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA