| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310492
Identifier: 18310492
GI number: 18310492
Start: 1765387
End: 1765854
Strand: Reverse
Name: 18310492
Synonym: CPE1510
Alternate gene names: NA
Gene position: 1765854-1765387 (Counterclockwise)
Preceding gene: 18310493
Following gene: 18310491
Centisome position: 58.25
GC content: 21.37
Gene sequence:
>468_bases ATGAAATATAAATTAAGTAAATTATTTATTGTTAAATCTATTATTCTTAGATTTTTAATTTTTTCACTTTTATATTTAGG TTTAAGCTTAGGATTTTATATATTAAAAAGTTTTAGTAGCTTTAACCAATTAAATGGAATTATGGATAATACTTTATGGG TTTTACAATTATTAATTACAGTTATATTTATTATATCAGTATTAATATGTCCAATAATTAAGTATTTTACGTGGTCTTAT TTTATATTTAGTGATTTTATTGAGATTAGATATGGAGTGTTATTTAAAAGGTATATATGTATAAAAAGGAATAATATAAA ATACATAAATGTATGCGAAAATCCAATAGATATGATTTTAAGAATAAAGAGCATAAATATTTATACTGCCGGAGGGAAAG TTAGTATTCCAGCAATTAATAAGGAGCAGGTAGAATTTTTCAATTATATAGTTCAGGAGAGAGTTTAG
Upstream 100 bases:
>100_bases AGGGAATTAAACAAGATTTATAGATATTTATAGATTTTTGGCAACGGGTAGCCTATAAGAATGGTTTTCTTATAGGTTTT TTTTATTAAAGGAGGAGTTA
Downstream 100 bases:
>100_bases GGGTGAAAAATGAATTTTTATAAAAAAAATCATTGGTGTAAAATTTTTATAACCTTTTTTAAGCTTATGAAAAATACTTG GCCAGTAATAATATTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLITVIFIISVLICPIIKYFTWSY FIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMILRIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV
Sequences:
>Translated_155_residues MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLITVIFIISVLICPIIKYFTWSY FIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMILRIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV >Mature_155_residues MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLITVIFIISVLICPIIKYFTWSY FIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMILRIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV
Specific function: Unknown
COG id: COG3402
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18327; Mature: 18327
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIFIISVLICPIIKYFTWSYFIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH RIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV HHHHCEEEECCCEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKYKLSKLFIVKSIILRFLIFSLLYLGLSLGFYILKSFSSFNQLNGIMDNTLWVLQLLIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIFIISVLICPIIKYFTWSYFIFSDFIEIRYGVLFKRYICIKRNNIKYINVCENPIDMIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCHHHHHH RIKSINIYTAGGKVSIPAINKEQVEFFNYIVQERV HHHHCEEEECCCEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA