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The map label for this gene is virS

Identifier: 18310482

GI number: 18310482

Start: 1751985

End: 1753307

Strand: Reverse

Name: virS

Synonym: CPE1500

Alternate gene names: NA

Gene position: 1753307-1751985 (Counterclockwise)

Preceding gene: 18310483

Following gene: 18310481

Centisome position: 57.84

GC content: 22.15

Gene sequence:

>1323_bases
ATGTTAATGAATCAAATGTTTTGGGACTTCATGGAGAATGCTTCCATGATTATAGAATGGGTAAGTTTTTATTTGATTAT
AAGTCAATTTAGCCCTAAGAAAAGAAAAAATAAACAAGAAGTTTACTCCTTCATTGTAATAATAATTTTTTCTGTCTTAT
TAAAAGTTCTAAATGTATATCCAAATGAAAGAATAGTAATATGTTTTTTTATAGGTTTAATATATTATAAATTTAATTTT
AGAGTAAACAATATAAAATGTATTATGATCTCATTAATATTTTGGTTATTTATGCTTACAGTAGAAGCTCTATCTATTTC
TTTTATAGTAAAAATAAATAGTTTAGTTAATGTATCAGATCTTTTAGGTAAAAATATCTATAGGATGGAAACTATGATAT
TATCAAAGGTTATTTTAATATCTTTAATAATGGTTGTTAGATGTTTAAAGTTTCGTGTAGATATTGGAAAGGGAGACTTT
ATTTATATTCTTACTCCTATAGCTACTAATATAATTATTATTTTAGTTATATTTGGATATGCCTTTAAGGGGGGACGAGA
AGGCTTTGGAGATAATGTATCCATATTCTTTGTTTCAATATTATTGTTATTATCTAATATGTCCTTAATGTTTATTGTTA
GTAAAATAATAAAAAATAACAAATTAAAATTAGAAAATGAATTTATAAAGGACAAGTTAGAAATGGAATATAAATATTAT
TCTAATTTAAAAGATAATCAAGAAAAAGTAAAGAGACTTTATCATGATATTAAAAATCACATAGCCTGTATTGAAGGAAA
TAACAAAGAAACAGGTATAAGAAAAAAATATATAGATAGTCTTAATTCAGAAATAGACAAGCTAAACTTAGGATTTAATA
CTGGAAATGAAGTGTTAGATGTAATATTAAATAATAAGAGAGAAAAATGTATGGAAAATAATATTTCTTTAAAGGTTTTT
ATAGATTTTTCAAAGGTTAATTTTATTGAGTACTTTGATATATGTACAATTTTCTCTAATTGCATTGATAATGCAATTGA
AGCTTGTAAAAAGATTAAAGATAATAATAGATACATAAGTTTAAAAGGTAATTGTGTAAATAATTTTTATGTTATTAAAA
TCGAGAATTCTAAAACAAATAAAATAAAAAAGTTAAATGGAGATTTTTTAACTGATAAAAAAGATAAGTTTTTACATGGT
ATTGGCCTTAAAAATATAAGACTAGCTTTAGAAAAATATAATGGAGAAATAATTATAGAACCTTTAGATGACAAATTCAT
ATTAAAAATGCTCATTCCTATAAATCAAGAAAAAGAAGCCTAG

Upstream 100 bases:

>100_bases
AAAAGGATTATCTTTTAATAAATAAATTTACTTTACCTGTAAGTAAGCATAGAATGAAAAATTTAAAATTAAGGTTAACT
AGCCTTTTAGGGGATTTAAT

Downstream 100 bases:

>100_bases
ATAAAAAAATCTACGCTTCTTTTTGTTATTTATATATTTGTTGACTATATTTATAATTATATTATATTTATATTAATTTT
AGAAGGGGTATATTTCCTAT

Product: sensor histidine kinase VirS

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MLMNQMFWDFMENASMIIEWVSFYLIISQFSPKKRKNKQEVYSFIVIIIFSVLLKVLNVYPNERIVICFFIGLIYYKFNF
RVNNIKCIMISLIFWLFMLTVEALSISFIVKINSLVNVSDLLGKNIYRMETMILSKVILISLIMVVRCLKFRVDIGKGDF
IYILTPIATNIIIILVIFGYAFKGGREGFGDNVSIFFVSILLLLSNMSLMFIVSKIIKNNKLKLENEFIKDKLEMEYKYY
SNLKDNQEKVKRLYHDIKNHIACIEGNNKETGIRKKYIDSLNSEIDKLNLGFNTGNEVLDVILNNKREKCMENNISLKVF
IDFSKVNFIEYFDICTIFSNCIDNAIEACKKIKDNNRYISLKGNCVNNFYVIKIENSKTNKIKKLNGDFLTDKKDKFLHG
IGLKNIRLALEKYNGEIIIEPLDDKFILKMLIPINQEKEA

Sequences:

>Translated_440_residues
MLMNQMFWDFMENASMIIEWVSFYLIISQFSPKKRKNKQEVYSFIVIIIFSVLLKVLNVYPNERIVICFFIGLIYYKFNF
RVNNIKCIMISLIFWLFMLTVEALSISFIVKINSLVNVSDLLGKNIYRMETMILSKVILISLIMVVRCLKFRVDIGKGDF
IYILTPIATNIIIILVIFGYAFKGGREGFGDNVSIFFVSILLLLSNMSLMFIVSKIIKNNKLKLENEFIKDKLEMEYKYY
SNLKDNQEKVKRLYHDIKNHIACIEGNNKETGIRKKYIDSLNSEIDKLNLGFNTGNEVLDVILNNKREKCMENNISLKVF
IDFSKVNFIEYFDICTIFSNCIDNAIEACKKIKDNNRYISLKGNCVNNFYVIKIENSKTNKIKKLNGDFLTDKKDKFLHG
IGLKNIRLALEKYNGEIIIEPLDDKFILKMLIPINQEKEA
>Mature_440_residues
MLMNQMFWDFMENASMIIEWVSFYLIISQFSPKKRKNKQEVYSFIVIIIFSVLLKVLNVYPNERIVICFFIGLIYYKFNF
RVNNIKCIMISLIFWLFMLTVEALSISFIVKINSLVNVSDLLGKNIYRMETMILSKVILISLIMVVRCLKFRVDIGKGDF
IYILTPIATNIIIILVIFGYAFKGGREGFGDNVSIFFVSILLLLSNMSLMFIVSKIIKNNKLKLENEFIKDKLEMEYKYY
SNLKDNQEKVKRLYHDIKNHIACIEGNNKETGIRKKYIDSLNSEIDKLNLGFNTGNEVLDVILNNKREKCMENNISLKVF
IDFSKVNFIEYFDICTIFSNCIDNAIEACKKIKDNNRYISLKGNCVNNFYVIKIENSKTNKIKKLNGDFLTDKKDKFLHG
IGLKNIRLALEKYNGEIIIEPLDDKFILKMLIPINQEKEA

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51407; Mature: 51407

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMNQMFWDFMENASMIIEWVSFYLIISQFSPKKRKNKQEVYSFIVIIIFSVLLKVLNVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PNERIVICFFIGLIYYKFNFRVNNIKCIMISLIFWLFMLTVEALSISFIVKINSLVNVSD
CCCCEEHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCHHH
LLGKNIYRMETMILSKVILISLIMVVRCLKFRVDIGKGDFIYILTPIATNIIIILVIFGY
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHH
AFKGGREGFGDNVSIFFVSILLLLSNMSLMFIVSKIIKNNKLKLENEFIKDKLEMEYKYY
HCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
SNLKDNQEKVKRLYHDIKNHIACIEGNNKETGIRKKYIDSLNSEIDKLNLGFNTGNEVLD
CCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHH
VILNNKREKCMENNISLKVFIDFSKVNFIEYFDICTIFSNCIDNAIEACKKIKDNNRYIS
HHHCCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LKGNCVNNFYVIKIENSKTNKIKKLNGDFLTDKKDKFLHGIGLKNIRLALEKYNGEIIIE
EECCEECCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEE
PLDDKFILKMLIPINQEKEA
ECCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLMNQMFWDFMENASMIIEWVSFYLIISQFSPKKRKNKQEVYSFIVIIIFSVLLKVLNVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PNERIVICFFIGLIYYKFNFRVNNIKCIMISLIFWLFMLTVEALSISFIVKINSLVNVSD
CCCCEEHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCHHH
LLGKNIYRMETMILSKVILISLIMVVRCLKFRVDIGKGDFIYILTPIATNIIIILVIFGY
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHH
AFKGGREGFGDNVSIFFVSILLLLSNMSLMFIVSKIIKNNKLKLENEFIKDKLEMEYKYY
HCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
SNLKDNQEKVKRLYHDIKNHIACIEGNNKETGIRKKYIDSLNSEIDKLNLGFNTGNEVLD
CCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHH
VILNNKREKCMENNISLKVFIDFSKVNFIEYFDICTIFSNCIDNAIEACKKIKDNNRYIS
HHHCCCHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LKGNCVNNFYVIKIENSKTNKIKKLNGDFLTDKKDKFLHGIGLKNIRLALEKYNGEIIIE
EECCEECCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCEEEEE
PLDDKFILKMLIPINQEKEA
ECCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA