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The map label for this gene is apl [H]

Identifier: 18310475

GI number: 18310475

Start: 1746252

End: 1746761

Strand: Reverse

Name: apl [H]

Synonym: CPE1493

Alternate gene names: 18310475

Gene position: 1746761-1746252 (Counterclockwise)

Preceding gene: 18310476

Following gene: 18310474

Centisome position: 57.62

GC content: 29.02

Gene sequence:

>510_bases
ATGGTGGTATTTATGACCATGCAAGATATTTTGTATTATATACATACATATGGGTTAATTGTATTATTTTTAATAGTTGT
AGGTGAATATTGCGTACCTGCAATGCCTACAGGTATAGTAATGCCAGCGGCTGGCATAATTGCAGGACAAGCTCATAAGG
GAATAATAAAAGTAATGCTAATATCCTTAATTGCAGGTCTGGTAGGAAGTATAATATTATATTTGTTAGGTTATTTTGTA
GGATCAACACTTTTAGAAAAGCTTAAAATTAAACATCCTAAAATAGAAGATAAGCTTGAAAAAACAGAAAAAATACTAGA
AAAGCATAGTTTTTTAGGGATATTCATATGTAGATTAATACCTATTATTAGAACCTATGTATCCTTAATATGTGGCACTG
TAAAGGTTAATTTTTTTAAGTTTATTATTTTTTCTATACCAGGTATATTTTGCTGGAACTTTACAGGAATTGTAGTTGGA
TATTTCTTTGGAGGAAAGATAAGATTTTAG

Upstream 100 bases:

>100_bases
CCTTTTTATTTTGTATTTACTAAATAGGAATAATAAGGATTAAAAGTGGTTATATGTTATAATATTATATATTGACTTGG
TAATATTAAGTAAGGAAAGA

Downstream 100 bases:

>100_bases
TTTGTGATTTTGATTTTGTGTATTGAATTTTATTTAGATTTTAGGGGAAAATATTAAATTAAGGGATTATATGAAAGGAG
AAAGAGAAAGTTTTATGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVVFMTMQDILYYIHTYGLIVLFLIVVGEYCVPAMPTGIVMPAAGIIAGQAHKGIIKVMLISLIAGLVGSIILYLLGYFV
GSTLLEKLKIKHPKIEDKLEKTEKILEKHSFLGIFICRLIPIIRTYVSLICGTVKVNFFKFIIFSIPGIFCWNFTGIVVG
YFFGGKIRF

Sequences:

>Translated_169_residues
MVVFMTMQDILYYIHTYGLIVLFLIVVGEYCVPAMPTGIVMPAAGIIAGQAHKGIIKVMLISLIAGLVGSIILYLLGYFV
GSTLLEKLKIKHPKIEDKLEKTEKILEKHSFLGIFICRLIPIIRTYVSLICGTVKVNFFKFIIFSIPGIFCWNFTGIVVG
YFFGGKIRF
>Mature_169_residues
MVVFMTMQDILYYIHTYGLIVLFLIVVGEYCVPAMPTGIVMPAAGIIAGQAHKGIIKVMLISLIAGLVGSIILYLLGYFV
GSTLLEKLKIKHPKIEDKLEKTEKILEKHSFLGIFICRLIPIIRTYVSLICGTVKVNFFKFIIFSIPGIFCWNFTGIVVG
YFFGGKIRF

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=149, Percent_Identity=28.1879194630872, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 18946; Mature: 18946

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVFMTMQDILYYIHTYGLIVLFLIVVGEYCVPAMPTGIVMPAAGIIAGQAHKGIIKVML
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH
ISLIAGLVGSIILYLLGYFVGSTLLEKLKIKHPKIEDKLEKTEKILEKHSFLGIFICRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIRTYVSLICGTVKVNFFKFIIFSIPGIFCWNFTGIVVGYFFGGKIRF
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MVVFMTMQDILYYIHTYGLIVLFLIVVGEYCVPAMPTGIVMPAAGIIAGQAHKGIIKVML
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH
ISLIAGLVGSIILYLLGYFVGSTLLEKLKIKHPKIEDKLEKTEKILEKHSFLGIFICRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIRTYVSLICGTVKVNFFKFIIFSIPGIFCWNFTGIVVGYFFGGKIRF
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]