| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310472
Identifier: 18310472
GI number: 18310472
Start: 1744021
End: 1744797
Strand: Reverse
Name: 18310472
Synonym: CPE1490
Alternate gene names: NA
Gene position: 1744797-1744021 (Counterclockwise)
Preceding gene: 18310474
Following gene: 18310471
Centisome position: 57.56
GC content: 27.54
Gene sequence:
>777_bases ATGGTTTTAATATATTTCTTAGTGGCTCTATTATCAACAATTTGTGGATCAATGGCTGGACTTGGTGGAGGAGTAATAAT AAAGCCAGTTTTAGATTTCTTAGGAGACTACAATATAGAAACTATTGGAGTTTTATCAGCATGTACTATTTTTTCTATGG CCTTAGTTTCGGTAATCAAACAATTATCTTATAAAAGTAAGATTGATATAAAAAATACTGGGCTATTAGGTATTGGTTCT GTAATTGGAGGATTATTAGGACAAAAGTTATTAACTTTTATATTAAAAATTGTTCAAGGAAGAATCGTATCTTTAGTGCA AAGTGGAATTTTAGCATTGTTATTAATATTTGTTTATATATACATGAATAATAAAGAAAAGTTTAAGAGTTACAAAATTG ATAACTTTATTTTAAGCACTATAATTGGGATATTTTTAGGATTAATAGCAGCCTTTTTAGGGATTGGGGGAGGACCAATA AATGTTGCCTTTTTAACAATATTTTTTTCTATGGAAGCTAAGAATGCTGCTAGAGATTCTGTCCTTATAATACTATTTTC ACAAGCATCTAAACTTTTAACTATTGCTTTTGGAACTGGCTTTTCTGGGTATGATCTATCCATGCTTCCATATATGATAT TTGGAGGTGTTTTAGGAGGGTTTATAGGGGCAAAATTTAATAGAATCTTTAGTAATGAAATAATATTAAGAGTTTTTAAT ACTATAACAATTTTAATTATAGGACTAAATATATATAATTTTATAAGTGCTATTTAA
Upstream 100 bases:
>100_bases CGAGCTTTTTAAATTAAATATGGAAAGGAGGGAATGTAAAAGAATATAATAGATGAGAATTTTAAAATAATATAAATAGC TAATTTAAGGAAGTGGTAAT
Downstream 100 bases:
>100_bases TAAAAACTTTTTAATTTAGGCCTAGATGAAATATATATGTAAATAAAATGTGATATAATAATTGAAAAGAATATATTCTC AACAAAGTGAGGGTGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFLGDYNIETIGVLSACTIFSMALVSVIKQLSYKSKIDIKNTGLLGIGS VIGGLLGQKLLTFILKIVQGRIVSLVQSGILALLLIFVYIYMNNKEKFKSYKIDNFILSTIIGIFLGLIAAFLGIGGGPI NVAFLTIFFSMEAKNAARDSVLIILFSQASKLLTIAFGTGFSGYDLSMLPYMIFGGVLGGFIGAKFNRIFSNEIILRVFN TITILIIGLNIYNFISAI
Sequences:
>Translated_258_residues MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFLGDYNIETIGVLSACTIFSMALVSVIKQLSYKSKIDIKNTGLLGIGS VIGGLLGQKLLTFILKIVQGRIVSLVQSGILALLLIFVYIYMNNKEKFKSYKIDNFILSTIIGIFLGLIAAFLGIGGGPI NVAFLTIFFSMEAKNAARDSVLIILFSQASKLLTIAFGTGFSGYDLSMLPYMIFGGVLGGFIGAKFNRIFSNEIILRVFN TITILIIGLNIYNFISAI >Mature_258_residues MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFLGDYNIETIGVLSACTIFSMALVSVIKQLSYKSKIDIKNTGLLGIGS VIGGLLGQKLLTFILKIVQGRIVSLVQSGILALLLIFVYIYMNNKEKFKSYKIDNFILSTIIGIFLGLIAAFLGIGGGPI NVAFLTIFFSMEAKNAARDSVLIILFSQASKLLTIAFGTGFSGYDLSMLPYMIFGGVLGGFIGAKFNRIFSNEIILRVFN TITILIIGLNIYNFISAI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27787; Mature: 27787
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFLGDYNIETIGVLSACTIFSMALVSVIK CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH QLSYKSKIDIKNTGLLGIGSVIGGLLGQKLLTFILKIVQGRIVSLVQSGILALLLIFVYI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YMNNKEKFKSYKIDNFILSTIIGIFLGLIAAFLGIGGGPINVAFLTIFFSMEAKNAARDS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC VLIILFSQASKLLTIAFGTGFSGYDLSMLPYMIFGGVLGGFIGAKFNRIFSNEIILRVFN EEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TITILIIGLNIYNFISAI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFLGDYNIETIGVLSACTIFSMALVSVIK CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH QLSYKSKIDIKNTGLLGIGSVIGGLLGQKLLTFILKIVQGRIVSLVQSGILALLLIFVYI HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YMNNKEKFKSYKIDNFILSTIIGIFLGLIAAFLGIGGGPINVAFLTIFFSMEAKNAARDS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC VLIILFSQASKLLTIAFGTGFSGYDLSMLPYMIFGGVLGGFIGAKFNRIFSNEIILRVFN EEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TITILIIGLNIYNFISAI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA