Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310458

Identifier: 18310458

GI number: 18310458

Start: 1732567

End: 1732851

Strand: Reverse

Name: 18310458

Synonym: CPE1476

Alternate gene names: NA

Gene position: 1732851-1732567 (Counterclockwise)

Preceding gene: 18310460

Following gene: 18310457

Centisome position: 57.16

GC content: 26.67

Gene sequence:

>285_bases
ATGGAGAAGTATTTAAGAATATTATTAGGAATAATTGTTACAATACTTATATTCGCTTTTGCAATTTGGGTATTACCTTA
TGTTTTAATAGGAGTTGCAATACTGATCCTTATAGGATGGGTGTACTTTAAATTTATAAGAAAGTATGTTAATAAAAACA
AAAAAGAAAAAACAGAAACTTATACTTACACATTTACAAAAGAAGAAAAGAAATCAGAGGCTGATATGCAAGATGATGGC
CCTGTTATTGATGTTGATTTTGAAGAAGTAAAAGATGATAAATAA

Upstream 100 bases:

>100_bases
AGCACATTAGGTTACAAATTAGAAAGGAATAATTGTTTTTTATTTCTTTCACTTTATGTTATAATTAATAAAATAAAAAA
TATAAAGAGAGTGATAATAT

Downstream 100 bases:

>100_bases
GGATTGATTTAATGAATTTTAGAAAGTTAAAAATATTTTTTGAAACAGCTAAATGTTTAAATATGACTAAAGTAGCTAAG
TCTATGTATATAAGTCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MEKYLRILLGIIVTILIFAFAIWVLPYVLIGVAILILIGWVYFKFIRKYVNKNKKEKTETYTYTFTKEEKKSEADMQDDG
PVIDVDFEEVKDDK

Sequences:

>Translated_94_residues
MEKYLRILLGIIVTILIFAFAIWVLPYVLIGVAILILIGWVYFKFIRKYVNKNKKEKTETYTYTFTKEEKKSEADMQDDG
PVIDVDFEEVKDDK
>Mature_94_residues
MEKYLRILLGIIVTILIFAFAIWVLPYVLIGVAILILIGWVYFKFIRKYVNKNKKEKTETYTYTFTKEEKKSEADMQDDG
PVIDVDFEEVKDDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11116; Mature: 11116

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYLRILLGIIVTILIFAFAIWVLPYVLIGVAILILIGWVYFKFIRKYVNKNKKEKTET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YTYTFTKEEKKSEADMQDDGPVIDVDFEEVKDDK
HHEEECCHHHHHHCCCCCCCCEECCCHHHCCCCC
>Mature Secondary Structure
MEKYLRILLGIIVTILIFAFAIWVLPYVLIGVAILILIGWVYFKFIRKYVNKNKKEKTET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YTYTFTKEEKKSEADMQDDGPVIDVDFEEVKDDK
HHEEECCHHHHHHCCCCCCCCEECCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA