| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310450
Identifier: 18310450
GI number: 18310450
Start: 1724731
End: 1725096
Strand: Reverse
Name: 18310450
Synonym: CPE1468
Alternate gene names: NA
Gene position: 1725096-1724731 (Counterclockwise)
Preceding gene: 18310451
Following gene: 18310448
Centisome position: 56.91
GC content: 31.97
Gene sequence:
>366_bases ATGAAAAGTCCATCAGAATATCATAAGGAAGGATATACTTGTGCAGAGGCTATTATAAAATCTTATAATGAAGAATTTAA TAAGGATATACCAGTATCTTTAGGAAGTGGCATGGGAACAGGAATGGCTGTTGGAAGTTTATGCGGAGCCGTAAATGGAG CAGTTGTAGCTATTGGTTTCATAAAAGGAAGAGAGAGTAATGATGAGAAAAATGAGGCCAGAGCTTATTCAAAGGAACTT CTAAATAGAATAAGAGAAGAGTTTAATTCAGAAATTTGTTTAGACTTAAAGAAAAGTAAGGTAAGTTGTGCAGAAATAAT AGATTTTGCATATGATACTTTAAAGGATGTTCTTAAAGAAAAATAA
Upstream 100 bases:
>100_bases GAAGTTATTTTACTAGTTTAATTTAATAGGTTGCAGAACATTATAAATACTTATCTTTTGTGGAATATACAAGAGATATT TTAGAAAGAAGGAGAAAAAT
Downstream 100 bases:
>100_bases AAGACATGCAGAAAATGCATGTCTTTTATTAAATGTAGGTAATTGAGTAAAATAATATTTATAAAACAAAACTATGATAA AGAGGAAGAGAATCTCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: C_GCAxxG_C_C Family Protein Subfamily
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKSPSEYHKEGYTCAEAIIKSYNEEFNKDIPVSLGSGMGTGMAVGSLCGAVNGAVVAIGFIKGRESNDEKNEARAYSKEL LNRIREEFNSEICLDLKKSKVSCAEIIDFAYDTLKDVLKEK
Sequences:
>Translated_121_residues MKSPSEYHKEGYTCAEAIIKSYNEEFNKDIPVSLGSGMGTGMAVGSLCGAVNGAVVAIGFIKGRESNDEKNEARAYSKEL LNRIREEFNSEICLDLKKSKVSCAEIIDFAYDTLKDVLKEK >Mature_121_residues MKSPSEYHKEGYTCAEAIIKSYNEEFNKDIPVSLGSGMGTGMAVGSLCGAVNGAVVAIGFIKGRESNDEKNEARAYSKEL LNRIREEFNSEICLDLKKSKVSCAEIIDFAYDTLKDVLKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13308; Mature: 13308
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPSEYHKEGYTCAEAIIKSYNEEFNKDIPVSLGSGMGTGMAVGSLCGAVNGAVVAIGF CCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHEEHH IKGRESNDEKNEARAYSKELLNRIREEFNSEICLDLKKSKVSCAEIIDFAYDTLKDVLKE HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC K C >Mature Secondary Structure MKSPSEYHKEGYTCAEAIIKSYNEEFNKDIPVSLGSGMGTGMAVGSLCGAVNGAVVAIGF CCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHEEHH IKGRESNDEKNEARAYSKELLNRIREEFNSEICLDLKKSKVSCAEIIDFAYDTLKDVLKE HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA