| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is furR [H]
Identifier: 18310444
GI number: 18310444
Start: 1719499
End: 1719909
Strand: Reverse
Name: furR [H]
Synonym: CPE1462
Alternate gene names: 18310444
Gene position: 1719909-1719499 (Counterclockwise)
Preceding gene: 18310445
Following gene: 18310443
Centisome position: 56.74
GC content: 25.55
Gene sequence:
>411_bases ATGGAAGTAAAAGAAATATTTAAAGCTAATGGTGTTAAAGTTACCAAAGCTAGATTATTAATATATGATTTGTTAAAGGA AAGTGATAGAAGTGTTACTGCCGATTATATATATAGTAAATGTAAAGAGATAAATTTATCTACTGTTTATAGAACTCTAG AGGTATTTTTAGAGAAGGATTTAGTGGATAAGTTTGAATTAGGAGATGGAAAAAGTTCTTATAAATTAAAGAATAGAAAT ATTCATAAGCATATTTTAGAATGTGATTTATGTCATAAAGAAATAGAAGTTCCATGTCCTATGCAACAGATTGAGGAGCT TTTAAGAAATCAAACAGGATTTAAAGTAAAAGAGCATAATCTTACTTTAAAGGGTATATGTGAAGAGTGTATAAATAATA AGAAAAAATAA
Upstream 100 bases:
>100_bases AGATCAGTTTAATACTCCAATTTAGAAATATATTTTATACAAGTTTTTTTATGTGATATAATTTATATTAATGATTTAAA TATTTGTTTAGGAGATTGTT
Downstream 100 bases:
>100_bases TTTTAAAATAGAATATTTACTTCAAAATTATAAGTATATGAAAATTTATAATTTTGATATTTTATTTATAATTAATACTA GATTAAATAATAAATTATAG
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MEVKEIFKANGVKVTKARLLIYDLLKESDRSVTADYIYSKCKEINLSTVYRTLEVFLEKDLVDKFELGDGKSSYKLKNRN IHKHILECDLCHKEIEVPCPMQQIEELLRNQTGFKVKEHNLTLKGICEECINNKKK
Sequences:
>Translated_136_residues MEVKEIFKANGVKVTKARLLIYDLLKESDRSVTADYIYSKCKEINLSTVYRTLEVFLEKDLVDKFELGDGKSSYKLKNRN IHKHILECDLCHKEIEVPCPMQQIEELLRNQTGFKVKEHNLTLKGICEECINNKKK >Mature_136_residues MEVKEIFKANGVKVTKARLLIYDLLKESDRSVTADYIYSKCKEINLSTVYRTLEVFLEKDLVDKFELGDGKSSYKLKNRN IHKHILECDLCHKEIEVPCPMQQIEELLRNQTGFKVKEHNLTLKGICEECINNKKK
Specific function: Hydrogen and organic peroxide sensor. Represses the expression of a regulon of peroxide-inducible genes such as katA, ahpC, ahpF, the heme biosynthesis operon (hemAXCDBL), fur, perR, zosA and mrgA [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15893; Mature: 15893
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKEIFKANGVKVTKARLLIYDLLKESDRSVTADYIYSKCKEINLSTVYRTLEVFLEKD CCHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LVDKFELGDGKSSYKLKNRNIHKHILECDLCHKEIEVPCPMQQIEELLRNQTGFKVKEHN HHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCC LTLKGICEECINNKKK CHHHHHHHHHHCCCCC >Mature Secondary Structure MEVKEIFKANGVKVTKARLLIYDLLKESDRSVTADYIYSKCKEINLSTVYRTLEVFLEKD CCHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LVDKFELGDGKSSYKLKNRNIHKHILECDLCHKEIEVPCPMQQIEELLRNQTGFKVKEHN HHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCC LTLKGICEECINNKKK CHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202460; 9384377; 9701813; 12100544 [H]