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The map label for this gene is yhbQ [C]

Identifier: 18310426

GI number: 18310426

Start: 1701724

End: 1702005

Strand: Reverse

Name: yhbQ [C]

Synonym: CPE1444

Alternate gene names: 18310426

Gene position: 1702005-1701724 (Counterclockwise)

Preceding gene: 18310428

Following gene: 18310425

Centisome position: 56.15

GC content: 25.89

Gene sequence:

>282_bases
TTGAATTATGTTTATATTTTAAAATGTAAAGATGAATCTTTATATACTGGATGGACTAATAATTTAGAAAAAAGAATAAA
AGCACATAATAATGGATGTGGAGCTAAATATACTAGAGGAAGAGGGCCGGTAAAACTTGTTTATTTTGAATTTTTTGAGA
ATAAAAGAGAAGCTCAAAGTAGAGAGTATTATATAAAGAAGCTTACAAGAAATCAGAAGTTACAACTAATAAGTAGCAAA
AGTATTAAGGAGGAAAATTATGAAAAAGAAATTAACCTATGA

Upstream 100 bases:

>100_bases
TATATCCTAATAAATTTTAAAAATAAAATTTATTAAATAATGTTATAGGGTCAGTTGATAAAAATAATAGGATGATTTAA
TATTAAAAGTGGTGATTACT

Downstream 100 bases:

>100_bases
TATTTATTTTGAAATTATTTTTTATATTTTACTTGTAGCATATTTAATCTATGGAATAATAAATAAAGATTTGATTTTAT
TATATTCAACAGGGTTAACC

Product: GIY-YIG domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MNYVYILKCKDESLYTGWTNNLEKRIKAHNNGCGAKYTRGRGPVKLVYFEFFENKREAQSREYYIKKLTRNQKLQLISSK
SIKEENYEKEINL

Sequences:

>Translated_93_residues
MNYVYILKCKDESLYTGWTNNLEKRIKAHNNGCGAKYTRGRGPVKLVYFEFFENKREAQSREYYIKKLTRNQKLQLISSK
SIKEENYEKEINL
>Mature_93_residues
MNYVYILKCKDESLYTGWTNNLEKRIKAHNNGCGAKYTRGRGPVKLVYFEFFENKREAQSREYYIKKLTRNQKLQLISSK
SIKEENYEKEINL

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=76, Percent_Identity=36.8421052631579, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1444_CLOPE (Q8XKF6)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562360.1
- ProteinModelPortal:   Q8XKF6
- SMR:   Q8XKF6
- GeneID:   989754
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1444
- NMPDR:   fig|195102.1.peg.1507
- HOGENOM:   HBG678874
- OMA:   KCKDESL
- PhylomeDB:   Q8XKF6
- ProtClustDB:   CLSK899334
- BioCyc:   CPER195102:CPE1444-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305
- SMART:   SM00465

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11164; Mature: 11164

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVYILKCKDESLYTGWTNNLEKRIKAHNNGCGAKYTRGRGPVKLVYFEFFENKREAQS
CCEEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHCCHHHHHH
REYYIKKLTRNQKLQLISSKSIKEENYEKEINL
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYVYILKCKDESLYTGWTNNLEKRIKAHNNGCGAKYTRGRGPVKLVYFEFFENKREAQS
CCEEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHCCHHHHHH
REYYIKKLTRNQKLQLISSKSIKEENYEKEINL
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842