| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310425
Identifier: 18310425
GI number: 18310425
Start: 1701126
End: 1701746
Strand: Reverse
Name: 18310425
Synonym: CPE1443
Alternate gene names: NA
Gene position: 1701746-1701126 (Counterclockwise)
Preceding gene: 18310426
Following gene: 18310424
Centisome position: 56.14
GC content: 23.35
Gene sequence:
>621_bases ATGAAAAAGAAATTAACCTATGATATTTATTTTGAAATTATTTTTTATATTTTACTTGTAGCATATTTAATCTATGGAAT AATAAATAAAGATTTGATTTTATTATATTCAACAGGGTTAACCTTTATAACCTTAATTTTACCTAGACTTATATGTAAGG TTGCAAAAATAAAATTATCTCCATTTTTAAATTTTATAATTGTAGGCTTTATATTTATTTCAATGTTTTTAGCTAAGGTA AATAATTTTTATGCAATACCACACTGGGACACTTTTTTACATACTGTATCAGGAATATTAACCTTTATACTTGGTTATAT GTTATTTTTATATCTTAATAATTACAAAACTGACAATGTAAATTCTTTAGTTATAGCTATTTTTTCTATGATATTTGGAA TTGCTTGCACAGCAGTATGGGAAATGTGGGAGTTCTTTACTGATCAAACCTTTGGATTAACTGCTCAAATAAGTTTATTT GACACTATGAAAGATATAATAACAGGAAGTATATTCCCTATAATTTTAGCTCCATCTTTAAATAAGTTTTTAAAGGGAAA AAAGAATAGATTATTTCAAGATTTAACAGACTTTATGAGAGAAAATAATAAAAGAAAATAG
Upstream 100 bases:
>100_bases AATAAAAGAGAAGCTCAAAGTAGAGAGTATTATATAAAGAAGCTTACAAGAAATCAGAAGTTACAACTAATAAGTAGCAA AAGTATTAAGGAGGAAAATT
Downstream 100 bases:
>100_bases AGTTAAGAAGAGTATGATGTATCAAAATAACTAAGTCATAAGTTCTAGTTTTGATACATCATATTTTTTATAGTAAAAAA TATTGATTTATTATTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKV NNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLF DTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK
Sequences:
>Translated_206_residues MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKV NNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLF DTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK >Mature_206_residues MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKV NNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLF DTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24009; Mature: 24009
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHH PFLNFIIVGFIFISMFLAKVNNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNV HHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH NSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLFDTMKDIITGSIFPIILAPSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHH NKFLKGKKNRLFQDLTDFMRENNKRK HHHHCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHH PFLNFIIVGFIFISMFLAKVNNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNV HHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH NSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLFDTMKDIITGSIFPIILAPSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHH NKFLKGKKNRLFQDLTDFMRENNKRK HHHHCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA