Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310425

Identifier: 18310425

GI number: 18310425

Start: 1701126

End: 1701746

Strand: Reverse

Name: 18310425

Synonym: CPE1443

Alternate gene names: NA

Gene position: 1701746-1701126 (Counterclockwise)

Preceding gene: 18310426

Following gene: 18310424

Centisome position: 56.14

GC content: 23.35

Gene sequence:

>621_bases
ATGAAAAAGAAATTAACCTATGATATTTATTTTGAAATTATTTTTTATATTTTACTTGTAGCATATTTAATCTATGGAAT
AATAAATAAAGATTTGATTTTATTATATTCAACAGGGTTAACCTTTATAACCTTAATTTTACCTAGACTTATATGTAAGG
TTGCAAAAATAAAATTATCTCCATTTTTAAATTTTATAATTGTAGGCTTTATATTTATTTCAATGTTTTTAGCTAAGGTA
AATAATTTTTATGCAATACCACACTGGGACACTTTTTTACATACTGTATCAGGAATATTAACCTTTATACTTGGTTATAT
GTTATTTTTATATCTTAATAATTACAAAACTGACAATGTAAATTCTTTAGTTATAGCTATTTTTTCTATGATATTTGGAA
TTGCTTGCACAGCAGTATGGGAAATGTGGGAGTTCTTTACTGATCAAACCTTTGGATTAACTGCTCAAATAAGTTTATTT
GACACTATGAAAGATATAATAACAGGAAGTATATTCCCTATAATTTTAGCTCCATCTTTAAATAAGTTTTTAAAGGGAAA
AAAGAATAGATTATTTCAAGATTTAACAGACTTTATGAGAGAAAATAATAAAAGAAAATAG

Upstream 100 bases:

>100_bases
AATAAAAGAGAAGCTCAAAGTAGAGAGTATTATATAAAGAAGCTTACAAGAAATCAGAAGTTACAACTAATAAGTAGCAA
AAGTATTAAGGAGGAAAATT

Downstream 100 bases:

>100_bases
AGTTAAGAAGAGTATGATGTATCAAAATAACTAAGTCATAAGTTCTAGTTTTGATACATCATATTTTTTATAGTAAAAAA
TATTGATTTATTATTAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKV
NNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLF
DTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK

Sequences:

>Translated_206_residues
MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKV
NNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLF
DTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK
>Mature_206_residues
MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLSPFLNFIIVGFIFISMFLAKV
NNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNVNSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLF
DTMKDIITGSIFPIILAPSLNKFLKGKKNRLFQDLTDFMRENNKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24009; Mature: 24009

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHH
PFLNFIIVGFIFISMFLAKVNNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNV
HHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLFDTMKDIITGSIFPIILAPSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHH
NKFLKGKKNRLFQDLTDFMRENNKRK
HHHHCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKKLTYDIYFEIIFYILLVAYLIYGIINKDLILLYSTGLTFITLILPRLICKVAKIKLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHH
PFLNFIIVGFIFISMFLAKVNNFYAIPHWDTFLHTVSGILTFILGYMLFLYLNNYKTDNV
HHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NSLVIAIFSMIFGIACTAVWEMWEFFTDQTFGLTAQISLFDTMKDIITGSIFPIILAPSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHH
NKFLKGKKNRLFQDLTDFMRENNKRK
HHHHCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA