Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310367

Identifier: 18310367

GI number: 18310367

Start: 1636222

End: 1636791

Strand: Reverse

Name: 18310367

Synonym: CPE1385

Alternate gene names: NA

Gene position: 1636791-1636222 (Counterclockwise)

Preceding gene: 18310368

Following gene: 18310365

Centisome position: 53.99

GC content: 33.33

Gene sequence:

>570_bases
ATGTCAAAGCGTAGACGCAAAAATAAAGTTAGTGAAAATTCAAATCAAGGAAATTTTATGGGGGGATTAAATCCTCAGAT
GTTAGATATGTTAGGACTTGGAGATGTTGATGTAAACAAAGTATCAGAAGTTCTATCTTCTATGGGCAGTGATGGATTCG
ATATGAATTCTATAAATTCTATTTTAAATAACAAGGATGGAGGAAAGAATAATTCTTCTAAGAATAAAAGTAGTAAGAAA
GGAAATATGAATAATAATAATCCTTTATCAGCTATTATGGGAGATGGAAACCCTATGGGGGATTTAAGCTCACTTATGGG
ATTACTAGGTGGCGGAGCACAAGGAATGAATCCAATGGGTAATATGGGGAACTTAGGAGCTATTGCTAATATGATGGGTG
GAAATATGGGAGGTGGAAATTTAGGAGCACCAAATAATGTAAGTGGTGATACAAGTATGGATCCAATAGTTACTATGATA
CTTTCCCTTAGAAATTTTGTTGATCCTCAAAGAGCTAGATTTTTAGATAAGGTTTTAAAGATGTATAAGGAAGGAAAAAT
AACTTATTAG

Upstream 100 bases:

>100_bases
TATGAATGTTGTTAGAATAATTTTTGGAGGGTTTTTTAACCCTCCTAAAAAAATAAAAAATTATAGTACATATACATAAA
TTTATTAAGGAGGATAGGAG

Downstream 100 bases:

>100_bases
ATTTATATACTTAATTTAAAAAAGAGATTTATCAAAACTTGTATATGAAATTTATAAATATATTATGAGAAATTCTTAAC
TTTGATCAAATTTTATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSKRRRKNKVSENSNQGNFMGGLNPQMLDMLGLGDVDVNKVSEVLSSMGSDGFDMNSINSILNNKDGGKNNSSKNKSSKK
GNMNNNNPLSAIMGDGNPMGDLSSLMGLLGGGAQGMNPMGNMGNLGAIANMMGGNMGGGNLGAPNNVSGDTSMDPIVTMI
LSLRNFVDPQRARFLDKVLKMYKEGKITY

Sequences:

>Translated_189_residues
MSKRRRKNKVSENSNQGNFMGGLNPQMLDMLGLGDVDVNKVSEVLSSMGSDGFDMNSINSILNNKDGGKNNSSKNKSSKK
GNMNNNNPLSAIMGDGNPMGDLSSLMGLLGGGAQGMNPMGNMGNLGAIANMMGGNMGGGNLGAPNNVSGDTSMDPIVTMI
LSLRNFVDPQRARFLDKVLKMYKEGKITY
>Mature_188_residues
SKRRRKNKVSENSNQGNFMGGLNPQMLDMLGLGDVDVNKVSEVLSSMGSDGFDMNSINSILNNKDGGKNNSSKNKSSKKG
NMNNNNPLSAIMGDGNPMGDLSSLMGLLGGGAQGMNPMGNMGNLGAIANMMGGNMGGGNLGAPNNVSGDTSMDPIVTMIL
SLRNFVDPQRARFLDKVLKMYKEGKITY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19960; Mature: 19829

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.1 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
9.6 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRRRKNKVSENSNQGNFMGGLNPQMLDMLGLGDVDVNKVSEVLSSMGSDGFDMNSINS
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
ILNNKDGGKNNSSKNKSSKKGNMNNNNPLSAIMGDGNPMGDLSSLMGLLGGGAQGMNPMG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
NMGNLGAIANMMGGNMGGGNLGAPNNVSGDTSMDPIVTMILSLRNFVDPQRARFLDKVLK
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MYKEGKITY
HHHCCCCCC
>Mature Secondary Structure 
SKRRRKNKVSENSNQGNFMGGLNPQMLDMLGLGDVDVNKVSEVLSSMGSDGFDMNSINS
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
ILNNKDGGKNNSSKNKSSKKGNMNNNNPLSAIMGDGNPMGDLSSLMGLLGGGAQGMNPMG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
NMGNLGAIANMMGGNMGGGNLGAPNNVSGDTSMDPIVTMILSLRNFVDPQRARFLDKVLK
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MYKEGKITY
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA