| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310365
Identifier: 18310365
GI number: 18310365
Start: 1634461
End: 1635057
Strand: Reverse
Name: 18310365
Synonym: CPE1383
Alternate gene names: NA
Gene position: 1635057-1634461 (Counterclockwise)
Preceding gene: 18310367
Following gene: 18310364
Centisome position: 53.94
GC content: 25.13
Gene sequence:
>597_bases ATGCTTTATAAAACTCATCTTGAAATAGGAGAAAATACATTTAATACTATTGAAGGAAGAGGAAGAAATTTAATTGATAA AAAAAGTTTTTTAAAAGGAAATGTTCTTCCAGATATTTCACCTAAATATAGGTTGAAAAAACATGGCAGAAAACAGTTTG AAGAGATTATTGATGAAAAGGTAAAAGAGCTAAGTAGGTTAAGTAGTGATGAAATAATAAATCATTTAGGAAAAGAAAAA TTTAGTATAGAGTTAGGAGTAATATGTCATTTTCTATGTGACTTTTTTTCTTTGCCTCATGATGAGGAATGGGGTTTTAA GGAGAGTGTAACCTTAAAGCATGTGTTATATGAGAAAAAGTTACATAAGGTTTTTAGTAAAGATATAATAATAAAAGATA GTTATAAAATACTAGGAAACTCAGATTATGATGTGTTCTTTAAAAATGCTTTAAAGAAATATAGAGATGTATATGGACAT AGAAATGATCTATTTTTTGCAATGTATTTAAATAATTCAGTTGTTAGATATGTTTTAGAATCCATAGAAGAAAATGATAA AATAAATCTTTCAAAAGAAAAACACATTGCTTTTTAA
Upstream 100 bases:
>100_bases AAATCACCTCAAATAGATTATATGCATATAATCTATTTTTTATTATTATTGTAATTTTTTTTTGCACTTTGAACAAAATA TACTAAGGGTGGTGATTAAT
Downstream 100 bases:
>100_bases TAATTGAAGCAAATATTACATATTATTATAAAAAGGATAAATGGGAGGAACTTAATATGATAATATTTGCAAAGAGGATT AATATAAAGGGAGTTATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLYKTHLEIGENTFNTIEGRGRNLIDKKSFLKGNVLPDISPKYRLKKHGRKQFEEIIDEKVKELSRLSSDEIINHLGKEK FSIELGVICHFLCDFFSLPHDEEWGFKESVTLKHVLYEKKLHKVFSKDIIIKDSYKILGNSDYDVFFKNALKKYRDVYGH RNDLFFAMYLNNSVVRYVLESIEENDKINLSKEKHIAF
Sequences:
>Translated_198_residues MLYKTHLEIGENTFNTIEGRGRNLIDKKSFLKGNVLPDISPKYRLKKHGRKQFEEIIDEKVKELSRLSSDEIINHLGKEK FSIELGVICHFLCDFFSLPHDEEWGFKESVTLKHVLYEKKLHKVFSKDIIIKDSYKILGNSDYDVFFKNALKKYRDVYGH RNDLFFAMYLNNSVVRYVLESIEENDKINLSKEKHIAF >Mature_198_residues MLYKTHLEIGENTFNTIEGRGRNLIDKKSFLKGNVLPDISPKYRLKKHGRKQFEEIIDEKVKELSRLSSDEIINHLGKEK FSIELGVICHFLCDFFSLPHDEEWGFKESVTLKHVLYEKKLHKVFSKDIIIKDSYKILGNSDYDVFFKNALKKYRDVYGH RNDLFFAMYLNNSVVRYVLESIEENDKINLSKEKHIAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23425; Mature: 23425
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKTHLEIGENTFNTIEGRGRNLIDKKSFLKGNVLPDISPKYRLKKHGRKQFEEIIDEK CCEECCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VKELSRLSSDEIINHLGKEKFSIELGVICHFLCDFFSLPHDEEWGFKESVTLKHVLYEKK HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LHKVFSKDIIIKDSYKILGNSDYDVFFKNALKKYRDVYGHRNDLFFAMYLNNSVVRYVLE HHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH SIEENDKINLSKEKHIAF HHCCCCCCCCCHHCCCCC >Mature Secondary Structure MLYKTHLEIGENTFNTIEGRGRNLIDKKSFLKGNVLPDISPKYRLKKHGRKQFEEIIDEK CCEECCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VKELSRLSSDEIINHLGKEKFSIELGVICHFLCDFFSLPHDEEWGFKESVTLKHVLYEKK HHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LHKVFSKDIIIKDSYKILGNSDYDVFFKNALKKYRDVYGHRNDLFFAMYLNNSVVRYVLE HHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH SIEENDKINLSKEKHIAF HHCCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA