| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310362
Identifier: 18310362
GI number: 18310362
Start: 1631454
End: 1631780
Strand: Reverse
Name: 18310362
Synonym: CPE1380
Alternate gene names: NA
Gene position: 1631780-1631454 (Counterclockwise)
Preceding gene: 18310364
Following gene: 18310361
Centisome position: 53.83
GC content: 24.46
Gene sequence:
>327_bases ATGCTTATTGCTATTTTATTATTATTACTAAGTATTTTTAACATATTTATAGGAAAAAAAGTGAAGGATAAAAATCTAGC TCATCTTTTATCAGGTTTTGATAAGGAAAAAGATGATTTAGAGTACGTAAGTAGTGTCTTAGGAAATACCTTTAAGTGGA TTGGAAATTTAGGGGTTATAATTACAGCTATTTATTTGATTCTAATTAATAGTATTTCAGTAGGATTATATTTAATTTGT TATGTGGGAGTTATAATACTATTTACAGTTAATCTTACCTTTAAAACAGATAGACACAGAAGAAGTAGATTAAAAGTATC AAAATAA
Upstream 100 bases:
>100_bases AAAAGTAAAATTAAAAAAATATTTAATAAAGTCAAGTGGAAACTGAGAATATATATGTAAAATTATAGTATTATATAATA AAAGGGTCTTAGGAGGATAT
Downstream 100 bases:
>100_bases ATTAAAAGTACTAAAAGTTAAAATCTTTTAGTACTTTTTTAAATTACTTTAAACTTTACTAAATTTTAATCAAAATATAT GATTTTAATTTATAATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVIITAIYLILINSISVGLYLIC YVGVIILFTVNLTFKTDRHRRSRLKVSK
Sequences:
>Translated_108_residues MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVIITAIYLILINSISVGLYLIC YVGVIILFTVNLTFKTDRHRRSRLKVSK >Mature_108_residues MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVIITAIYLILINSISVGLYLIC YVGVIILFTVNLTFKTDRHRRSRLKVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12228; Mature: 12228
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVI CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ITAIYLILINSISVGLYLICYVGVIILFTVNLTFKTDRHRRSRLKVSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC >Mature Secondary Structure MLIAILLLLLSIFNIFIGKKVKDKNLAHLLSGFDKEKDDLEYVSSVLGNTFKWIGNLGVI CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ITAIYLILINSISVGLYLICYVGVIILFTVNLTFKTDRHRRSRLKVSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA