Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yegX [C]

Identifier: 18310343

GI number: 18310343

Start: 1604254

End: 1605129

Strand: Reverse

Name: yegX [C]

Synonym: CPE1361

Alternate gene names: 18310343

Gene position: 1605129-1604254 (Counterclockwise)

Preceding gene: 18310344

Following gene: 18310342

Centisome position: 52.95

GC content: 30.71

Gene sequence:

>876_bases
ATGAAAGTTGGAGTTTATCATTATTGGAGAGGTACTTCAAGTGCTATAGAACAAGCTCAGAATGTAGTTAGAACTCTAGG
AGATAAACATATTGATTGTAAGATTGCAATAGATGTAGAGCAAATAGATGGATTATCAAACAAAGAATTAAATAATAGTG
TTCTTCAATTAGCAGAAGAATTAGAAAGATTAATAGGAGCTGAGATTTGTATTTATTGTAATACAAACTATGCTAGAAAT
GTATTAGATAGCAGGCTAGGAAAGTATTCATTATGGGTAGCTCATTATGGAGTAAATAAGCCAGGAGATAATCATATATG
GGATAAATGGGCAGGATTCCAATATTCAGATAGTGGAACTTCAAATGTAAATGGAAGCTTAGATTTAGATGAATTTACAG
AAGAAATTTTTATTGATGGAGAAAGTTTAAAAGCAACTGAAAATAAAACATTTCCTACTAATGCAAGAGCAAAGATAGCA
TTAGACCAAAGAAGTAATCCGAGTGATGATTACACAGACTTAGGAGAAGTATATGCAGGTGAAAGAATACAAGTATTAGC
AGAGATTTGTGACAAAGAGAATTACTTACCAGTTAAATATTGGGAATATTCATTAGGATGTGAAAGCTCAAAGGTTTGGG
TTAATGCAAATGAGGATTACTTAGAGATAGATACTAATGCTAGATCATTTAATATAATTACAGAACTTGATGTTAGGTAT
GAACCAACATCTAACTCAGATAGAATGGGATATGTTAAAAATAATGAGAGATTATATGTCCATAAAATTGAAGGAAACTA
TGCCCTTGCAACATACTACGAAGGAAATGGATATAAAACTGCTTGGTTTACAAAACAATATATAATTAAAGATTAA

Upstream 100 bases:

>100_bases
GGATATGAAGTTTGTTATATTAAAATTACAGAAGGAAGAGGATATATAGATCCATGCTTTGAAGAAAATTATAATAAAGC
AATAGCAGATAGCAGCAGGA

Downstream 100 bases:

>100_bases
TAATTAAGTCTAGTTGGGATACTCCTAACTAGACTTTTTTTGTTTACAAATTTGTTATATAATGTTAATGAATTGAAGTG
TTAGGAGAAGAGGTAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF10 [H]

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKVGVYHYWRGTSSAIEQAQNVVRTLGDKHIDCKIAIDVEQIDGLSNKELNNSVLQLAEELERLIGAEICIYCNTNYARN
VLDSRLGKYSLWVAHYGVNKPGDNHIWDKWAGFQYSDSGTSNVNGSLDLDEFTEEIFIDGESLKATENKTFPTNARAKIA
LDQRSNPSDDYTDLGEVYAGERIQVLAEICDKENYLPVKYWEYSLGCESSKVWVNANEDYLEIDTNARSFNIITELDVRY
EPTSNSDRMGYVKNNERLYVHKIEGNYALATYYEGNGYKTAWFTKQYIIKD

Sequences:

>Translated_291_residues
MKVGVYHYWRGTSSAIEQAQNVVRTLGDKHIDCKIAIDVEQIDGLSNKELNNSVLQLAEELERLIGAEICIYCNTNYARN
VLDSRLGKYSLWVAHYGVNKPGDNHIWDKWAGFQYSDSGTSNVNGSLDLDEFTEEIFIDGESLKATENKTFPTNARAKIA
LDQRSNPSDDYTDLGEVYAGERIQVLAEICDKENYLPVKYWEYSLGCESSKVWVNANEDYLEIDTNARSFNIITELDVRY
EPTSNSDRMGYVKNNERLYVHKIEGNYALATYYEGNGYKTAWFTKQYIIKD
>Mature_291_residues
MKVGVYHYWRGTSSAIEQAQNVVRTLGDKHIDCKIAIDVEQIDGLSNKELNNSVLQLAEELERLIGAEICIYCNTNYARN
VLDSRLGKYSLWVAHYGVNKPGDNHIWDKWAGFQYSDSGTSNVNGSLDLDEFTEEIFIDGESLKATENKTFPTNARAKIA
LDQRSNPSDDYTDLGEVYAGERIQVLAEICDKENYLPVKYWEYSLGCESSKVWVNANEDYLEIDTNARSFNIITELDVRY
EPTSNSDRMGYVKNNERLYVHKIEGNYALATYYEGNGYKTAWFTKQYIIKD

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To C.perfringens CPE1502 [H]

Homologues:

Organism=Escherichia coli, GI87082043, Length=143, Percent_Identity=32.1678321678322, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: NA

Molecular weight: Translated: 33313; Mature: 33313

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGVYHYWRGTSSAIEQAQNVVRTLGDKHIDCKIAIDVEQIDGLSNKELNNSVLQLAEE
CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCHHHHHHHHHHHH
LERLIGAEICIYCNTNYARNVLDSRLGKYSLWVAHYGVNKPGDNHIWDKWAGFQYSDSGT
HHHHHCCEEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHCCCEECCCCC
SNVNGSLDLDEFTEEIFIDGESLKATENKTFPTNARAKIALDQRSNPSDDYTDLGEVYAG
CCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCC
ERIQVLAEICDKENYLPVKYWEYSLGCESSKVWVNANEDYLEIDTNARSFNIITELDVRY
CHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEEEEEEEE
EPTSNSDRMGYVKNNERLYVHKIEGNYALATYYEGNGYKTAWFTKQYIIKD
CCCCCCCCEEEEECCCEEEEEEECCCEEEEEEEECCCEEEEEEEEEEEECC
>Mature Secondary Structure
MKVGVYHYWRGTSSAIEQAQNVVRTLGDKHIDCKIAIDVEQIDGLSNKELNNSVLQLAEE
CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCHHHHHHHHHHHH
LERLIGAEICIYCNTNYARNVLDSRLGKYSLWVAHYGVNKPGDNHIWDKWAGFQYSDSGT
HHHHHCCEEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHCCCEECCCCC
SNVNGSLDLDEFTEEIFIDGESLKATENKTFPTNARAKIALDQRSNPSDDYTDLGEVYAG
CCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCC
ERIQVLAEICDKENYLPVKYWEYSLGCESSKVWVNANEDYLEIDTNARSFNIITELDVRY
CHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEEEEEEEE
EPTSNSDRMGYVKNNERLYVHKIEGNYALATYYEGNGYKTAWFTKQYIIKD
CCCCCCCCEEEEECCCEEEEEEECCCEEEEEEEECCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2901768 [H]