Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310344

Identifier: 18310344

GI number: 18310344

Start: 1605491

End: 1606051

Strand: Reverse

Name: 18310344

Synonym: CPE1362

Alternate gene names: NA

Gene position: 1606051-1605491 (Counterclockwise)

Preceding gene: 18310345

Following gene: 18310343

Centisome position: 52.98

GC content: 28.7

Gene sequence:

>561_bases
ATGAAGGGGTTAATAGTTTTTGGAGAAAAAGGTTCAGGAAAAGATACTGTGGCTAAGCTTATAAATGAGTATTCAGAGAA
AAGTGTTAGTTTCTTTAATATAGGAGACTTAGTTAGGGATATGTCATGTATATTTTTAGCAACAGATAAATGGGAAAATA
AAAAAAGAGAATTTTATGTAGATACGGCTATAAAACTTAAGGAAATAGATAAGGACTTTTTAAGTTATTATGTATTAGGA
AAAATACTAGATAAATTTAAAAAGAAATCTATGAAGGATATAGATAATGAGCAACTTATAATAGTAACTGGTGGAAGAAC
ATATGAGGACTTTGAATTCTGGAAAAAGAGCGGTTTCAAAACATTAGGGGTTAAATGTGATGAGAAAGTAAGAATAGAAA
GATTAAAGAGTAGAGATGGTTATGAACAAAACTCACAAGATGATCTTGAAAAGAATACAAGAAAAATAATTGACTTATGT
GACTTTACAGTGGATAATAGCGGATCTTTTAAGGATTTAACAAAGGAAGTAACAGATTTTGTGGTTGAAAATGGATTATA
A

Upstream 100 bases:

>100_bases
AGTTTTAAATTTTAAAGAATAATTAAAATAAGATATTTAAAACTTCCAATAAATGTTATAATTAATATGTAATCTTATAA
CTAAGAAAGGGATTGAGAAT

Downstream 100 bases:

>100_bases
AATTTTACTAGACTAAATCATAATCATTAGAATGTAGGGTATTAAAAAAGAAAATAGAAATAATGGGTTAATGATAAAGA
AAATATAAATTATAAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKGLIVFGEKGSGKDTVAKLINEYSEKSVSFFNIGDLVRDMSCIFLATDKWENKKREFYVDTAIKLKEIDKDFLSYYVLG
KILDKFKKKSMKDIDNEQLIIVTGGRTYEDFEFWKKSGFKTLGVKCDEKVRIERLKSRDGYEQNSQDDLEKNTRKIIDLC
DFTVDNSGSFKDLTKEVTDFVVENGL

Sequences:

>Translated_186_residues
MKGLIVFGEKGSGKDTVAKLINEYSEKSVSFFNIGDLVRDMSCIFLATDKWENKKREFYVDTAIKLKEIDKDFLSYYVLG
KILDKFKKKSMKDIDNEQLIIVTGGRTYEDFEFWKKSGFKTLGVKCDEKVRIERLKSRDGYEQNSQDDLEKNTRKIIDLC
DFTVDNSGSFKDLTKEVTDFVVENGL
>Mature_186_residues
MKGLIVFGEKGSGKDTVAKLINEYSEKSVSFFNIGDLVRDMSCIFLATDKWENKKREFYVDTAIKLKEIDKDFLSYYVLG
KILDKFKKKSMKDIDNEQLIIVTGGRTYEDFEFWKKSGFKTLGVKCDEKVRIERLKSRDGYEQNSQDDLEKNTRKIIDLC
DFTVDNSGSFKDLTKEVTDFVVENGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21544; Mature: 21544

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLIVFGEKGSGKDTVAKLINEYSEKSVSFFNIGDLVRDMSCIFLATDKWENKKREFYV
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCEECHHHHHHHHHEEEEECCCCCCCCCEEEE
DTAIKLKEIDKDFLSYYVLGKILDKFKKKSMKDIDNEQLIIVTGGRTYEDFEFWKKSGFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCE
TLGVKCDEKVRIERLKSRDGYEQNSQDDLEKNTRKIIDLCDFTVDNSGSFKDLTKEVTDF
EECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VVENGL
HHHCCC
>Mature Secondary Structure
MKGLIVFGEKGSGKDTVAKLINEYSEKSVSFFNIGDLVRDMSCIFLATDKWENKKREFYV
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCEECHHHHHHHHHEEEEECCCCCCCCCEEEE
DTAIKLKEIDKDFLSYYVLGKILDKFKKKSMKDIDNEQLIIVTGGRTYEDFEFWKKSGFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCE
TLGVKCDEKVRIERLKSRDGYEQNSQDDLEKNTRKIIDLCDFTVDNSGSFKDLTKEVTDF
EECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VVENGL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA