| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is mro [H]
Identifier: 18310326
GI number: 18310326
Start: 1587084
End: 1588106
Strand: Reverse
Name: mro [H]
Synonym: CPE1344
Alternate gene names: 18310326
Gene position: 1588106-1587084 (Counterclockwise)
Preceding gene: 18310329
Following gene: 18310322
Centisome position: 52.39
GC content: 27.96
Gene sequence:
>1023_bases TTGGTTATAGAAAGTAAAATTAATGATGAAATAAGTAAAATAATATTAAAAAATAATAAAGTATCTGTGGAAATATTAAA CTTAGGTGCTATTGTAGAAAAAATAAATGTAGAGGATAGATATGGAAATAAAGAAAATATAGTGCTTGCATATAAGGATG AGGAAAGCTATATTGAAAATCCTTCAAGTTTAGGTTCTATAGTAGGAAGAGTAGCAGGTAGAATAGGAAAGGGTTCCTTT AAATTAAATGGTATTAATTATGAATTAGATAAAAATAATAATGGAAACTGCCTTCATGGAGGGTATAAAGGTTTTAGTAA AAAAATCTGGGATTATTCATATAGTGAAGATGAAGAAAAATCTACAGCAATATTTACTTCTTTTAGTAAGGATGGAGAAG GGGGATTCCCAGGAAATTTAAAGGTTCAGGTTACTTATTCTCTAGAAGGAGACAAGCTTTCCATAGAATATAGAGCTTCT TCAGATAAAGATACAGTAGTAAATTTAACTAATCATTCATATTTTAATTTATCAGGAAATAATAAAAGAAATGTATTAGA ACAAAAGCTTTATATAGATTCAGATAAAATATGTGAGTTAGATAAAGATTTAATTCCAACAGGAGAGTTTTTAAGTGTAG AAAAAACACCTTTTGACTTTAGGAAGTTAAAAAAAATAGGTGAGGATATAAATAAAAACCACTTGCAATTAGAAATTGGA TCAGGATATGATCATCCATGGGTTTTAAATAAGAAGGGTGATTTTGATGCAATCTTAGTAGATGAAGAATCAGGAAGAAT TATGAAGGTTAAGACAGATCAAAAGGCAGTAGTATGTTATTCAATGAATTTTCCAGATGAATTACCTTTAGAAAATGGCA AAGTAGCCAAAAAGCATGATGGAATATGTTTTGAAACACAAAACTTACCAGTAGGATATGATGATTGCTTCTTAGATGGA ATAATACTTAAAAAGGATGAAGAGTATTATCAAAAAACAACTTTTGAATTTGAGTATATGTAA
Upstream 100 bases:
>100_bases AATTCTTAAAAATAGCATGTTTAATAGAGTAAATATTATTGAAAAACTTATATTAAGTTGTTAAAATCAAACTATAGATA TGAAAGGGAGAGTGAATAAT
Downstream 100 bases:
>100_bases AAAAATGTATGGAAGAAATATTTCTTCCATACATTTTTTATTAGTTCTTTTTCATGTATTTTCTCATATCAAGAGCTACA GCTAGAACTATAATTAAACC
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MVIESKINDEISKIILKNNKVSVEILNLGAIVEKINVEDRYGNKENIVLAYKDEESYIENPSSLGSIVGRVAGRIGKGSF KLNGINYELDKNNNGNCLHGGYKGFSKKIWDYSYSEDEEKSTAIFTSFSKDGEGGFPGNLKVQVTYSLEGDKLSIEYRAS SDKDTVVNLTNHSYFNLSGNNKRNVLEQKLYIDSDKICELDKDLIPTGEFLSVEKTPFDFRKLKKIGEDINKNHLQLEIG SGYDHPWVLNKKGDFDAILVDEESGRIMKVKTDQKAVVCYSMNFPDELPLENGKVAKKHDGICFETQNLPVGYDDCFLDG IILKKDEEYYQKTTFEFEYM
Sequences:
>Translated_340_residues MVIESKINDEISKIILKNNKVSVEILNLGAIVEKINVEDRYGNKENIVLAYKDEESYIENPSSLGSIVGRVAGRIGKGSF KLNGINYELDKNNNGNCLHGGYKGFSKKIWDYSYSEDEEKSTAIFTSFSKDGEGGFPGNLKVQVTYSLEGDKLSIEYRAS SDKDTVVNLTNHSYFNLSGNNKRNVLEQKLYIDSDKICELDKDLIPTGEFLSVEKTPFDFRKLKKIGEDINKNHLQLEIG SGYDHPWVLNKKGDFDAILVDEESGRIMKVKTDQKAVVCYSMNFPDELPLENGKVAKKHDGICFETQNLPVGYDDCFLDG IILKKDEEYYQKTTFEFEYM >Mature_340_residues MVIESKINDEISKIILKNNKVSVEILNLGAIVEKINVEDRYGNKENIVLAYKDEESYIENPSSLGSIVGRVAGRIGKGSF KLNGINYELDKNNNGNCLHGGYKGFSKKIWDYSYSEDEEKSTAIFTSFSKDGEGGFPGNLKVQVTYSLEGDKLSIEYRAS SDKDTVVNLTNHSYFNLSGNNKRNVLEQKLYIDSDKICELDKDLIPTGEFLSVEKTPFDFRKLKKIGEDINKNHLQLEIG SGYDHPWVLNKKGDFDAILVDEESGRIMKVKTDQKAVVCYSMNFPDELPLENGKVAKKHDGICFETQNLPVGYDDCFLDG IILKKDEEYYQKTTFEFEYM
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=330, Percent_Identity=38.4848484848485, Blast_Score=236, Evalue=2e-62, Organism=Escherichia coli, GI1786971, Length=336, Percent_Identity=32.4404761904762, Blast_Score=152, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17557428, Length=332, Percent_Identity=26.8072289156627, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI115533334, Length=332, Percent_Identity=26.8072289156627, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319493, Length=216, Percent_Identity=31.0185185185185, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6322004, Length=342, Percent_Identity=28.0701754385965, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324399, Length=221, Percent_Identity=28.9592760180996, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI24583720, Length=339, Percent_Identity=31.858407079646, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24668278, Length=345, Percent_Identity=31.0144927536232, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24659048, Length=355, Percent_Identity=32.112676056338, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI24668282, Length=350, Percent_Identity=30.8571428571429, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24641876, Length=340, Percent_Identity=27.0588235294118, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 38560; Mature: 38560
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIESKINDEISKIILKNNKVSVEILNLGAIVEKINVEDRYGNKENIVLAYKDEESYIEN CEECCHHHHHHHEEEEECCCEEEEEEECCEEEEEECCHHCCCCCCCEEEEEECCHHHHCC PSSLGSIVGRVAGRIGKGSFKLNGINYELDKNNNGNCLHGGYKGFSKKIWDYSYSEDEEK HHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCEEECCCCCHHHHHCCCCCCCCCCC STAIFTSFSKDGEGGFPGNLKVQVTYSLEGDKLSIEYRASSDKDTVVNLTNHSYFNLSGN CEEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEEECCEEEEECCC NKRNVLEQKLYIDSDKICELDKDLIPTGEFLSVEKTPFDFRKLKKIGEDINKNHLQLEIG CCHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC SGYDHPWVLNKKGDFDAILVDEESGRIMKVKTDQKAVVCYSMNFPDELPLENGKVAKKHD CCCCCCEEECCCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEECCC GICFETQNLPVGYDDCFLDGIILKKDEEYYQKTTFEFEYM CEEEECCCCCCCCCHHHCCCEEEECCHHHHHHEEEEEEEC >Mature Secondary Structure MVIESKINDEISKIILKNNKVSVEILNLGAIVEKINVEDRYGNKENIVLAYKDEESYIEN CEECCHHHHHHHEEEEECCCEEEEEEECCEEEEEECCHHCCCCCCCEEEEEECCHHHHCC PSSLGSIVGRVAGRIGKGSFKLNGINYELDKNNNGNCLHGGYKGFSKKIWDYSYSEDEEK HHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCEEECCCCCHHHHHCCCCCCCCCCC STAIFTSFSKDGEGGFPGNLKVQVTYSLEGDKLSIEYRASSDKDTVVNLTNHSYFNLSGN CEEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEEECCEEEEECCC NKRNVLEQKLYIDSDKICELDKDLIPTGEFLSVEKTPFDFRKLKKIGEDINKNHLQLEIG CCHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC SGYDHPWVLNKKGDFDAILVDEESGRIMKVKTDQKAVVCYSMNFPDELPLENGKVAKKHD CCCCCCEEECCCCCEEEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEECCC GICFETQNLPVGYDDCFLDGIILKKDEEYYQKTTFEFEYM CEEEECCCCCCCCCHHHCCCEEEECCHHHHHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]