| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is artP [H]
Identifier: 18310306
GI number: 18310306
Start: 1566266
End: 1567054
Strand: Direct
Name: artP [H]
Synonym: CPE1324
Alternate gene names: 18310306
Gene position: 1566266-1567054 (Clockwise)
Preceding gene: 18310299
Following gene: 18310307
Centisome position: 51.67
GC content: 27.76
Gene sequence:
>789_bases ATGAAAAAGTTATTATTTTTATTAATTAGCATAGTAATTTTATCTATTCTTATTTCTGGTTGTTCCTCAAAGAAAATAGA AACTAAAAAGGATAGTAACACAGTGATTATAGGAATAGATGACACTTTCGTTCCTATGGGTTTTAAAAATGAAAAAGGTG ACATAGTTGGTTTTGATGTTGATTTAGCAAAAGAAGCTTTTAAGCGTATGAATTTAAAAGTTATTTTTCAACCAATAGAT TGGTCAATGAAAGAAACTGAACTTACTAATGGAAATATAGATTTGATTTGGAATGGATACACCATGACACATGAAAGAGA AAAAAAAGTTGCATTTACAAATTCATATTTAAAAAATAGACAAGTTATAGTTACCCTTTCTAATTCTAATATAAATACCT TAAATGATCTAAAAGGGAAAACTGTAACTACTCAAGATGGTTCTAGCTCTCTTGATACCTTATTTGAAAATCCAGAACTA ACTAAATCCTTTAAAAATGGAGAGCCTGTACTTTTTGATAGCTTTAATGATTGCTTTATGGATTTAGAAGCTGGAAGAAG TGACGCAGTTGTTTGTGATGAAATTCTTGCTCAGTATTATATTTTTAAAAATGGCCCTAGTAAATTTCATGTTCTTACTG AAGACTTAGGGGAAGAAAGTTATAGCATAGGACTTAGAAAAAATTCTAATTTAATAGATCCTTTAAATAAAACTTTAGAA GATATGAAAGAGGATGGAACTATAGCTAAAATATCTAATAAATGGTTTGGAAAAGATTTAGAGAAATAA
Upstream 100 bases:
>100_bases ACGTTTTGTCAATATTTAAATAAAATTATTTCATTTCTCATTTGACTTTATTACTTCATCATGGTAAAGTATTAGTGTAA TAAATCGAAAGGAGAAAGAT
Downstream 100 bases:
>100_bases GGAGGTATTAACTTTGAATTATATTATTACTTTAATGCCCTCAATAATAGAAGGCTTAAAAAATACATTAGGTGTTTTTA TATTAACACTACTTTTATCT
Product: amino acid ABC transporter
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKKLLFLLISIVILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDVDLAKEAFKRMNLKVIFQPID WSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNSYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPEL TKSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEILAQYYIFKNGPSKFHVLTEDLGEESYSIGLRKNSNLIDPLNKTLE DMKEDGTIAKISNKWFGKDLEK
Sequences:
>Translated_262_residues MKKLLFLLISIVILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDVDLAKEAFKRMNLKVIFQPID WSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNSYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPEL TKSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEILAQYYIFKNGPSKFHVLTEDLGEESYSIGLRKNSNLIDPLNKTLE DMKEDGTIAKISNKWFGKDLEK >Mature_262_residues MKKLLFLLISIVILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDVDLAKEAFKRMNLKVIFQPID WSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNSYLKNRQVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPEL TKSFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEILAQYYIFKNGPSKFHVLTEDLGEESYSIGLRKNSNLIDPLNKTLE DMKEDGTIAKISNKWFGKDLEK
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=260, Percent_Identity=31.1538461538462, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788228, Length=260, Percent_Identity=28.4615384615385, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1788649, Length=255, Percent_Identity=32.156862745098, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788648, Length=239, Percent_Identity=34.3096234309623, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1787085, Length=263, Percent_Identity=28.8973384030418, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787088, Length=254, Percent_Identity=28.740157480315, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786876, Length=240, Percent_Identity=25.4166666666667, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29582; Mature: 29582
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLFLLISIVILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDV CHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCEECCCCCCCCCCEEEEEH DLAKEAFKRMNLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNSYLKNR HHHHHHHHHCCEEEEEEECCCCCCEEEECCCCEEEEECCEEECCCCCCCEEEHHHHHCCC QVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDSFNDCFM EEEEEECCCCCCCHHHCCCCEEEECCCCCHHHHHHCCCHHHHHCCCCCCEEEECCCHHHH DLEAGRSDAVVCDEILAQYYIFKNGPSKFHVLTEDLGEESYSIGLRKNSNLIDPLNKTLE HHCCCCCCCHHHHHHHHHHEEEECCCCEEEEEEHHCCCCCEEEEECCCCCCCCHHHHHHH DMKEDGTIAKISNKWFGKDLEK HHHCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKKLLFLLISIVILSILISGCSSKKIETKKDSNTVIIGIDDTFVPMGFKNEKGDIVGFDV CHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCEECCCCCCCCCCEEEEEH DLAKEAFKRMNLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNSYLKNR HHHHHHHHHCCEEEEEEECCCCCCEEEECCCCEEEEECCEEECCCCCCCEEEHHHHHCCC QVIVTLSNSNINTLNDLKGKTVTTQDGSSSLDTLFENPELTKSFKNGEPVLFDSFNDCFM EEEEEECCCCCCCHHHCCCCEEEECCCCCHHHHHHCCCHHHHHCCCCCCEEEECCCHHHH DLEAGRSDAVVCDEILAQYYIFKNGPSKFHVLTEDLGEESYSIGLRKNSNLIDPLNKTLE HHCCCCCCCHHHHHHHHHHEEEECCCCEEEEEEHHCCCCCEEEEECCCCCCCCHHHHHHH DMKEDGTIAKISNKWFGKDLEK HHHCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]