Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is artQ [H]

Identifier: 18310307

GI number: 18310307

Start: 1567068

End: 1567709

Strand: Direct

Name: artQ [H]

Synonym: CPE1325

Alternate gene names: 18310307

Gene position: 1567068-1567709 (Clockwise)

Preceding gene: 18310306

Following gene: 18310308

Centisome position: 51.69

GC content: 27.26

Gene sequence:

>642_bases
TTGAATTATATTATTACTTTAATGCCCTCAATAATAGAAGGCTTAAAAAATACATTAGGTGTTTTTATATTAACACTACT
TTTATCTATTCCTTTAGGAATAATAGTTGCAATACTTAGATTATCAAATATTAAAATAGTAAACTTTATATCATCTTTAT
ATGTTTTAGTTATGCGTGGAACCCCTTTATTATTACAACTAATATTTATATTTTTTGGACTACCAATAATAGGAGTTAGC
ATAGATAGATTCCCAGCTGCCATAATAGCATTCACCTTAAATTACGCAGCTTATTTTGGCGAAATATTTAGATCTGGTAT
AAAAGATATTGATAGAGGACAATTTGAAGCAAGTAAAATCCTAGGTCTTTCAAAATGGTTTACCTTTAAAAAGATAATTC
TTCCTCAATCATTTAAAAAGACTTTACCTTCAATTGCCAATGAAGTTATTACCTTAGTTAAAGATACATCCTTAGTTTAT
GTAGTTGGCATAGGTGAACTTTTAAGAGCTGGTAAAATTGCAAGTAACAGAGACGCTTCTCTCCTTCCCTTGTTTTTAAT
AGGCATAATATATCTACTGTTAATAGGAATTCTAACTAAAATATTTAATAGGTTAGAGAAAAAATATTCATATTATAATT
AG

Upstream 100 bases:

>100_bases
TTAAATAAAACTTTAGAAGATATGAAAGAGGATGGAACTATAGCTAAAATATCTAATAAATGGTTTGGAAAAGATTTAGA
GAAATAAGGAGGTATTAACT

Downstream 100 bases:

>100_bases
GAGGATTAAAAATGATAGAAATAAAAAACTTAGAGAAATCCTTTAAGGGTAATAAAATATTAGAAAACATCTCTTTCACT
CTTAAGGAAGGAGAAATATT

Product: amino acid ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFIFFGLPIIGVS
IDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVY
VVGIGELLRAGKIASNRDASLLPLFLIGIIYLLLIGILTKIFNRLEKKYSYYN

Sequences:

>Translated_213_residues
MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFIFFGLPIIGVS
IDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVY
VVGIGELLRAGKIASNRDASLLPLFLIGIIYLLLIGILTKIFNRLEKKYSYYN
>Mature_213_residues
MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFIFFGLPIIGVS
IDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVY
VVGIGELLRAGKIASNRDASLLPLFLIGIIYLLLIGILTKIFNRLEKKYSYYN

Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=35.9223300970874, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=36.5853658536585, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786873, Length=200, Percent_Identity=33, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=30.6603773584906, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI87082239, Length=194, Percent_Identity=31.4432989690722, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=30, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=29.4392523364486, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=24.8868778280543, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI48994930, Length=161, Percent_Identity=27.9503105590062, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=22.5806451612903, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23823; Mature: 23823

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
TPLLLQLIFIFFGLPIIGVSIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKI
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCCH
LLPLFLIGIIYLLLIGILTKIFNRLEKKYSYYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
TPLLLQLIFIFFGLPIIGVSIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKI
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCCH
LLPLFLIGIIYLLLIGILTKIFNRLEKKYSYYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]