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The map label for this gene is 18310292

Identifier: 18310292

GI number: 18310292

Start: 1550721

End: 1551560

Strand: Reverse

Name: 18310292

Synonym: CPE1310

Alternate gene names: NA

Gene position: 1551560-1550721 (Counterclockwise)

Preceding gene: 18310293

Following gene: 18310291

Centisome position: 51.18

GC content: 29.64

Gene sequence:

>840_bases
TTGGATAAAATAAAGATCATAACAGATAGTACCTGTGACTTATCTAAGGAGATTATAGAAAAGTATGACATAGACGTAAT
GCCTATGTTAATAAACTTTGGAGAAGAGAGCTATTTAGATGGAGTTGAAATAAAAGTAGACTCTATGATGGAGAGAATTG
AAAGAGAAGATACTCTTCCAACTACAGCTCAAATAGTTCCAACTAGATTTATAGAGAAATATAAGGGTTACTTAGAAGAG
GGATATAAAGTTATATCTATACATATATCATCTAATATGAGTGGTACTTATCAATCAGCATGTTTAGCTAAGACTGAGTT
GGAAAGTGATGATATAGTTGTAATAGATTCAAGAAATGTAACAGTTGGACTTGGATTAATTATATTAAAAGCAGCTAGGT
TAATAGAATCAGGAATAACTTTAGAGGATTTAGAAAAAGAAATTTTAGAATACAGGAATCATATTAAAAGTACTATAGCC
TTTGAAAGTTTGGACAACTTAGTAAGAGGGGGAAGACTTTCAAAAGGAAAAGCTTTATTTGTTAGTGCCTTAGGCATAAA
ACTTATGCTTAATGTACTAGATGGGGAAATGAATGTTCAAGGAAAAATAAGAGGAACTAAAAAGATGGTAAAGGCTATGA
TTGAACAATTTGATTCAATTCCTAAAAAAGAAGGAGAGCCTATTATATTAGTTGAACTTGAAAATGAGGACATTTACTTA
CCTATAAAGGAATATTTAGAAAATAATAATATTGAATATTTAAAACTTCCTCTAGGATGTTCAGTAGCAATTCATTCTGG
TCCTAAAGTTTGTGCATTATTTTATGTAGAAGAATATTAA

Upstream 100 bases:

>100_bases
CTACTAGAAGTTTGAATTTATCAAACACAGTAGCTATTATAGCTTATGAAGCTTTAAGACAAATTGGATTTCCAAACATG
AAATAAGGGGGAAATATATT

Downstream 100 bases:

>100_bases
AAGAAACTCCTAAGGGAGTTTCTTTTTTTTACATAAATTTTCTTACTTAAAGAAATAATAATTTTGACTAAAAAAATAGG
AGGACTAAAAATGAAATTAA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLPTTAQIVPTRFIEKYKGYLEE
GYKVISIHISSNMSGTYQSACLAKTELESDDIVVIDSRNVTVGLGLIILKAARLIESGITLEDLEKEILEYRNHIKSTIA
FESLDNLVRGGRLSKGKALFVSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL
PIKEYLENNNIEYLKLPLGCSVAIHSGPKVCALFYVEEY

Sequences:

>Translated_279_residues
MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLPTTAQIVPTRFIEKYKGYLEE
GYKVISIHISSNMSGTYQSACLAKTELESDDIVVIDSRNVTVGLGLIILKAARLIESGITLEDLEKEILEYRNHIKSTIA
FESLDNLVRGGRLSKGKALFVSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL
PIKEYLENNNIEYLKLPLGCSVAIHSGPKVCALFYVEEY
>Mature_279_residues
MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLPTTAQIVPTRFIEKYKGYLEE
GYKVISIHISSNMSGTYQSACLAKTELESDDIVVIDSRNVTVGLGLIILKAARLIESGITLEDLEKEILEYRNHIKSTIA
FESLDNLVRGGRLSKGKALFVSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL
PIKEYLENNNIEYLKLPLGCSVAIHSGPKVCALFYVEEY

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1310_CLOPE (Q8XKT3)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562226.1
- ProteinModelPortal:   Q8XKT3
- SMR:   Q8XKT3
- GeneID:   989619
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1310
- NMPDR:   fig|195102.1.peg.1373
- HOGENOM:   HBG729520
- OMA:   IITDSTC
- ProtClustDB:   CLSK882532
- BioCyc:   CPER195102:CPE1310-MONOMER
- InterPro:   IPR003797
- TIGRFAMs:   TIGR00762

Pfam domain/function: PF02645 DegV

EC number: NA

Molecular weight: Translated: 31456; Mature: 31456

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS51482 DEGV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLP
CCCEEEEECCCCHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCC
TTAQIVPTRFIEKYKGYLEEGYKVISIHISSNMSGTYQSACLAKTELESDDIVVIDSRNV
CHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCE
TVGLGLIILKAARLIESGITLEDLEKEILEYRNHIKSTIAFESLDNLVRGGRLSKGKALF
EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL
HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE
PIKEYLENNNIEYLKLPLGCSVAIHSGPKVCALFYVEEY
EHHHHCCCCCEEEEEECCCCEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MDKIKIITDSTCDLSKEIIEKYDIDVMPMLINFGEESYLDGVEIKVDSMMERIEREDTLP
CCCEEEEECCCCHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCC
TTAQIVPTRFIEKYKGYLEEGYKVISIHISSNMSGTYQSACLAKTELESDDIVVIDSRNV
CHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCE
TVGLGLIILKAARLIESGITLEDLEKEILEYRNHIKSTIAFESLDNLVRGGRLSKGKALF
EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VSALGIKLMLNVLDGEMNVQGKIRGTKKMVKAMIEQFDSIPKKEGEPIILVELENEDIYL
HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE
PIKEYLENNNIEYLKLPLGCSVAIHSGPKVCALFYVEEY
EHHHHCCCCCEEEEEECCCCEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842