Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310271

Identifier: 18310271

GI number: 18310271

Start: 1521612

End: 1523180

Strand: Reverse

Name: 18310271

Synonym: CPE1289

Alternate gene names: NA

Gene position: 1523180-1521612 (Counterclockwise)

Preceding gene: 18310272

Following gene: 18310270

Centisome position: 50.25

GC content: 30.98

Gene sequence:

>1569_bases
ATGTCTAAAAAAAATATAAGCAATGATAAGATTAGTGAAGCTGGGAAAGTAATGCTTATTCAAGATAATCAAAAGAAAAA
GGTACAGAGTGCATTAGGGGATTTTCAAATAGGAATAGATAAATTGTCTAATGTTAATGATGAAAATCTAAATAACTTAG
ATTTACTTATCGAAATGGCTGAATCAATGTGTTTAGACAGTGGAATTGATATAGATAATATTAATTATGATATAGATAAT
TTTGAATCAGATTTATGTGAACTTACACAAGAAGAAAAGAATTCCATAAAAGCATATGAATTTGAAAAAATTGATATTGT
TGAATTAAATGAGCAGACAAGCTGGAATGAATATATAAATAATATAGAAAAATATGCATTAGACAATAGTGTAGATTTAT
CGAAAGATCCATTTGAGAGTTTATTATCACAAGAACAAAAAAGGGAAATAAGCGAAAGAATAAAAAATGATTACACTATG
AAAAAAGCTAATTGCGATAAGTATGATTATTTAATTGGAGCTTTAAGTGGAGTGGCGTGTGGCCTTATTGATAGCTTTTT
TGTAGGAATGCCAGGGGCAAGTAAGCTTGGTAAATGGACAGACAAAAAAACAGATGATCTAGTTCAAGTGTTTGCAGGAA
AGGTATGGGATTCAGATAAAAAAGGTGGAGCTAATTTAAAGAAGAGACCAGATAGTATTGGTTCAGCTATTGGATATTTA
GAAAAAAGATTTAAAGTGAATTATGATGCAAGATATGCATCTGATATTGGCTTAGATAATGAAATGTTTAAGATGAGTGC
ATCAAATCATCATTTAAAGTCACTTGGACATTCTCCAGATTTAATAGGATTATTCTTTTCAGTTTTGGATCAATTTACAG
GAACATCTAGTTTTATAAGCAATGGAAGAATAATCAGAGTTGAAAGCAATGACAGCAAATTTAAACTTCAAGGAGAAACT
TTTACATCAAGATTGTTTTGCGGGTTCTGTAACTGGATTGGACATATAATGTCAGATGTTGCAGGTTCAAGCGGGACAAG
GGGGCATAAAGATGGAAAAAGAGGAGCAGGAGTATCAATTCCATTTTTTGAGATGTTTCAATTTTGTGATTTTGGATCTT
TAAATATTAATGGAGAAAGTAAAACTTTTGCAGAGCTATCAGTCAAGATTTTTGAAGAAGGATATGATGCAAGACATGGG
GCTGCTATGGCAATACCTGTGTTTTTAAACGAAGTTATTATAAGATTCTTATGGATGTTGAAAAGCAGATTTTATCATAA
GAACACTTGGAAAGAATCTATTCCTTTTGGAAACAACTCTGAACTAAGAAGAATGTTACTAGTAGGGCATGGAAGTTTAT
GTATAGTAGATGGTATAGATGCAGGAATACGTTCTGGAGGAAATATTTTAACTTTTGCACTTAATTTGAATTCAGTAGCA
TGGTCAAGATTTGCATTTGCAGGACTGCAGGAAATTCGTATGTTATATAAAGAAGGTTGTTTAGATATTGAAGCAATGGA
CAGAGATTTAGAAACAGAATGGAATAGACTGTATAATGATATAATTTAA

Upstream 100 bases:

>100_bases
TGCAACTTTAGCAAGTGCTAAAGGAGTAGCAAAAAGTTTTGTTAAAAACTTTCTAAATTAAAAAATAAATAGTATTACAA
TTTAAGGGTGGAAAAATGCA

Downstream 100 bases:

>100_bases
AATTTATTGGTGGCTTTCAAAGGTCATGATTCTCCTCCATCAAACCAACCCACGAAAATATAATTGGATTTTCGTGGGTT
GGTTTTATTGCATAATAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSKKNISNDKISEAGKVMLIQDNQKKKVQSALGDFQIGIDKLSNVNDENLNNLDLLIEMAESMCLDSGIDIDNINYDIDN
FESDLCELTQEEKNSIKAYEFEKIDIVELNEQTSWNEYINNIEKYALDNSVDLSKDPFESLLSQEQKREISERIKNDYTM
KKANCDKYDYLIGALSGVACGLIDSFFVGMPGASKLGKWTDKKTDDLVQVFAGKVWDSDKKGGANLKKRPDSIGSAIGYL
EKRFKVNYDARYASDIGLDNEMFKMSASNHHLKSLGHSPDLIGLFFSVLDQFTGTSSFISNGRIIRVESNDSKFKLQGET
FTSRLFCGFCNWIGHIMSDVAGSSGTRGHKDGKRGAGVSIPFFEMFQFCDFGSLNINGESKTFAELSVKIFEEGYDARHG
AAMAIPVFLNEVIIRFLWMLKSRFYHKNTWKESIPFGNNSELRRMLLVGHGSLCIVDGIDAGIRSGGNILTFALNLNSVA
WSRFAFAGLQEIRMLYKEGCLDIEAMDRDLETEWNRLYNDII

Sequences:

>Translated_522_residues
MSKKNISNDKISEAGKVMLIQDNQKKKVQSALGDFQIGIDKLSNVNDENLNNLDLLIEMAESMCLDSGIDIDNINYDIDN
FESDLCELTQEEKNSIKAYEFEKIDIVELNEQTSWNEYINNIEKYALDNSVDLSKDPFESLLSQEQKREISERIKNDYTM
KKANCDKYDYLIGALSGVACGLIDSFFVGMPGASKLGKWTDKKTDDLVQVFAGKVWDSDKKGGANLKKRPDSIGSAIGYL
EKRFKVNYDARYASDIGLDNEMFKMSASNHHLKSLGHSPDLIGLFFSVLDQFTGTSSFISNGRIIRVESNDSKFKLQGET
FTSRLFCGFCNWIGHIMSDVAGSSGTRGHKDGKRGAGVSIPFFEMFQFCDFGSLNINGESKTFAELSVKIFEEGYDARHG
AAMAIPVFLNEVIIRFLWMLKSRFYHKNTWKESIPFGNNSELRRMLLVGHGSLCIVDGIDAGIRSGGNILTFALNLNSVA
WSRFAFAGLQEIRMLYKEGCLDIEAMDRDLETEWNRLYNDII
>Mature_521_residues
SKKNISNDKISEAGKVMLIQDNQKKKVQSALGDFQIGIDKLSNVNDENLNNLDLLIEMAESMCLDSGIDIDNINYDIDNF
ESDLCELTQEEKNSIKAYEFEKIDIVELNEQTSWNEYINNIEKYALDNSVDLSKDPFESLLSQEQKREISERIKNDYTMK
KANCDKYDYLIGALSGVACGLIDSFFVGMPGASKLGKWTDKKTDDLVQVFAGKVWDSDKKGGANLKKRPDSIGSAIGYLE
KRFKVNYDARYASDIGLDNEMFKMSASNHHLKSLGHSPDLIGLFFSVLDQFTGTSSFISNGRIIRVESNDSKFKLQGETF
TSRLFCGFCNWIGHIMSDVAGSSGTRGHKDGKRGAGVSIPFFEMFQFCDFGSLNINGESKTFAELSVKIFEEGYDARHGA
AMAIPVFLNEVIIRFLWMLKSRFYHKNTWKESIPFGNNSELRRMLLVGHGSLCIVDGIDAGIRSGGNILTFALNLNSVAW
SRFAFAGLQEIRMLYKEGCLDIEAMDRDLETEWNRLYNDII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58808; Mature: 58677

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKNISNDKISEAGKVMLIQDNQKKKVQSALGDFQIGIDKLSNVNDENLNNLDLLIEMA
CCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHH
ESMCLDSGIDIDNINYDIDNFESDLCELTQEEKNSIKAYEFEKIDIVELNEQTSWNEYIN
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCHHHHHH
NIEKYALDNSVDLSKDPFESLLSQEQKREISERIKNDYTMKKANCDKYDYLIGALSGVAC
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
GLIDSFFVGMPGASKLGKWTDKKTDDLVQVFAGKVWDSDKKGGANLKKRPDSIGSAIGYL
HHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
EKRFKVNYDARYASDIGLDNEMFKMSASNHHLKSLGHSPDLIGLFFSVLDQFTGTSSFIS
HHHHCCCCCCHHHHCCCCCHHHHEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHC
NGRIIRVESNDSKFKLQGETFTSRLFCGFCNWIGHIMSDVAGSSGTRGHKDGKRGAGVSI
CCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PFFEMFQFCDFGSLNINGESKTFAELSVKIFEEGYDARHGAAMAIPVFLNEVIIRFLWML
CHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH
KSRFYHKNTWKESIPFGNNSELRRMLLVGHGSLCIVDGIDAGIRSGGNILTFALNLNSVA
HHHHHCCCCCHHCCCCCCCHHHHHHHEECCCCEEEEECCCHHHCCCCCEEEEEEECCHHH
WSRFAFAGLQEIRMLYKEGCLDIEAMDRDLETEWNRLYNDII
HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKNISNDKISEAGKVMLIQDNQKKKVQSALGDFQIGIDKLSNVNDENLNNLDLLIEMA
CCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHH
ESMCLDSGIDIDNINYDIDNFESDLCELTQEEKNSIKAYEFEKIDIVELNEQTSWNEYIN
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCHHHHHH
NIEKYALDNSVDLSKDPFESLLSQEQKREISERIKNDYTMKKANCDKYDYLIGALSGVAC
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
GLIDSFFVGMPGASKLGKWTDKKTDDLVQVFAGKVWDSDKKGGANLKKRPDSIGSAIGYL
HHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
EKRFKVNYDARYASDIGLDNEMFKMSASNHHLKSLGHSPDLIGLFFSVLDQFTGTSSFIS
HHHHCCCCCCHHHHCCCCCHHHHEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHC
NGRIIRVESNDSKFKLQGETFTSRLFCGFCNWIGHIMSDVAGSSGTRGHKDGKRGAGVSI
CCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PFFEMFQFCDFGSLNINGESKTFAELSVKIFEEGYDARHGAAMAIPVFLNEVIIRFLWML
CHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH
KSRFYHKNTWKESIPFGNNSELRRMLLVGHGSLCIVDGIDAGIRSGGNILTFALNLNSVA
HHHHHCCCCCHHCCCCCCCHHHHHHHEECCCCEEEEECCCHHHCCCCCEEEEEEECCHHH
WSRFAFAGLQEIRMLYKEGCLDIEAMDRDLETEWNRLYNDII
HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA