Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310270

Identifier: 18310270

GI number: 18310270

Start: 1520263

End: 1521327

Strand: Reverse

Name: 18310270

Synonym: CPE1288

Alternate gene names: NA

Gene position: 1521327-1520263 (Counterclockwise)

Preceding gene: 18310271

Following gene: 18310269

Centisome position: 50.19

GC content: 21.6

Gene sequence:

>1065_bases
ATGGAAATACATGTTATTGAAAATGCTGTTAATTCATTAGAGGTAGGCTTAGATTTTTATAATAAATTTTTAAATAATTT
AGATAAAATAGATATTTCAGTATCTCATTTCGGAAATTTAAAATTTGCAGTAGTAGCAGTTCAAAATTCAGTTGAATTAT
TATCAAAAGCAATTCTATTAGATGTTAATGAATTGATTGTTTTTAATTTGAATATCGAAGAAGACTCAGTAGTTTGCAAT
ATGCTAAGAGAGCAATTTTATAATAAATGCAGAAAAGCACACATTGCATATAATGCAGTATTTTCAAAAAATAATTATAA
AACTATAGATTACAGTAAATGTATTCTTTTAATAATGAAAATATTTACTGATAAGATTAGTGCAAAAAATTATAATACAT
TAAAGTTATTGGGAGAATATAGAAATACTTTAACACATTTAGGGTATGCTTCAACATTTGAGTGGTATAAAATTTTAATA
AATTTAAACGATACTCTAAATTTGATATTGGAATTTTATATAGGTAATATAAATAAATCTGATAGATACTTTTCAAATAA
AATTACTGATTCAATAAGATATACATTGGAAAAAAGTAACAAAGAATTACTAGATTTATGGATGGCTAGCAAAGAAATAT
TATTAGAGAATATTAATGAAAAGTTGGACAGTTATTTTGATAATAGTATTTCTGTTGAAGATGTTAAACAGGATAATGAA
TATGGCTTTTATGAAAGCATAACTTTTAAGTATAATGAAGAGAGTAATTTAAAATGGATATTTAAATATTCTTATCTAAA
TGAAGCTATTATAATAATTGATGAGAATAACAAGATTGTTTCTTTTATAAGTTTAGATGATGAAAACTTAAAGTATAAAA
AGGATGCTGATAATATTCCTATTGAATTAGAAAAATTTGATTTATATGTTCCTATAAAATTATTAGAGTATGAAGAAAAT
AAATTATATGATATTAAATCTAGAAGTTCAACATTAAAAATAAAATGTGAAGATAATAGTAATGCAAGAACATTAATTAA
TATGTATTTGAAAAATTGTAAGTAG

Upstream 100 bases:

>100_bases
TTAATAATTCAAGAATAAAGTAAAATTGTTAATTTTTAATAAATATAATATACTTATATGGTAAAATAATTATTATATAA
ATAAACTAAGGAGAGATATT

Downstream 100 bases:

>100_bases
AATAAAATTATATTTTAGTGGATTTTAAAGATCATCTTCCGTCTCAATCAAATTAGTAATTATACAATAAAATAAAAAAA
TAGAGAAAATGTAAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEIHVIENAVNSLEVGLDFYNKFLNNLDKIDISVSHFGNLKFAVVAVQNSVELLSKAILLDVNELIVFNLNIEEDSVVCN
MLREQFYNKCRKAHIAYNAVFSKNNYKTIDYSKCILLIMKIFTDKISAKNYNTLKLLGEYRNTLTHLGYASTFEWYKILI
NLNDTLNLILEFYIGNINKSDRYFSNKITDSIRYTLEKSNKELLDLWMASKEILLENINEKLDSYFDNSISVEDVKQDNE
YGFYESITFKYNEESNLKWIFKYSYLNEAIIIIDENNKIVSFISLDDENLKYKKDADNIPIELEKFDLYVPIKLLEYEEN
KLYDIKSRSSTLKIKCEDNSNARTLINMYLKNCK

Sequences:

>Translated_354_residues
MEIHVIENAVNSLEVGLDFYNKFLNNLDKIDISVSHFGNLKFAVVAVQNSVELLSKAILLDVNELIVFNLNIEEDSVVCN
MLREQFYNKCRKAHIAYNAVFSKNNYKTIDYSKCILLIMKIFTDKISAKNYNTLKLLGEYRNTLTHLGYASTFEWYKILI
NLNDTLNLILEFYIGNINKSDRYFSNKITDSIRYTLEKSNKELLDLWMASKEILLENINEKLDSYFDNSISVEDVKQDNE
YGFYESITFKYNEESNLKWIFKYSYLNEAIIIIDENNKIVSFISLDDENLKYKKDADNIPIELEKFDLYVPIKLLEYEEN
KLYDIKSRSSTLKIKCEDNSNARTLINMYLKNCK
>Mature_354_residues
MEIHVIENAVNSLEVGLDFYNKFLNNLDKIDISVSHFGNLKFAVVAVQNSVELLSKAILLDVNELIVFNLNIEEDSVVCN
MLREQFYNKCRKAHIAYNAVFSKNNYKTIDYSKCILLIMKIFTDKISAKNYNTLKLLGEYRNTLTHLGYASTFEWYKILI
NLNDTLNLILEFYIGNINKSDRYFSNKITDSIRYTLEKSNKELLDLWMASKEILLENINEKLDSYFDNSISVEDVKQDNE
YGFYESITFKYNEESNLKWIFKYSYLNEAIIIIDENNKIVSFISLDDENLKYKKDADNIPIELEKFDLYVPIKLLEYEEN
KLYDIKSRSSTLKIKCEDNSNARTLINMYLKNCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41606; Mature: 41606

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIHVIENAVNSLEVGLDFYNKFLNNLDKIDISVSHFGNLKFAVVAVQNSVELLSKAILL
CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHE
DVNELIVFNLNIEEDSVVCNMLREQFYNKCRKAHIAYNAVFSKNNYKTIDYSKCILLIMK
EECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEECHHHHHHHHHH
IFTDKISAKNYNTLKLLGEYRNTLTHLGYASTFEWYKILINLNDTLNLILEFYIGNINKS
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCC
DRYFSNKITDSIRYTLEKSNKELLDLWMASKEILLENINEKLDSYFDNSISVEDVKQDNE
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
YGFYESITFKYNEESNLKWIFKYSYLNEAIIIIDENNKIVSFISLDDENLKYKKDADNIP
CCCEEEEEEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEECCCCCCCC
IELEKFDLYVPIKLLEYEENKLYDIKSRSSTLKIKCEDNSNARTLINMYLKNCK
EEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEIHVIENAVNSLEVGLDFYNKFLNNLDKIDISVSHFGNLKFAVVAVQNSVELLSKAILL
CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHE
DVNELIVFNLNIEEDSVVCNMLREQFYNKCRKAHIAYNAVFSKNNYKTIDYSKCILLIMK
EECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEECHHHHHHHHHH
IFTDKISAKNYNTLKLLGEYRNTLTHLGYASTFEWYKILINLNDTLNLILEFYIGNINKS
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCC
DRYFSNKITDSIRYTLEKSNKELLDLWMASKEILLENINEKLDSYFDNSISVEDVKQDNE
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
YGFYESITFKYNEESNLKWIFKYSYLNEAIIIIDENNKIVSFISLDDENLKYKKDADNIP
CCCEEEEEEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEECCCCCCCC
IELEKFDLYVPIKLLEYEENKLYDIKSRSSTLKIKCEDNSNARTLINMYLKNCK
EEEEEEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA