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The map label for this gene is potB [H]

Identifier: 18310254

GI number: 18310254

Start: 1492571

End: 1492909

Strand: Reverse

Name: potB [H]

Synonym: CPE1272

Alternate gene names: 18310254

Gene position: 1492909-1492571 (Counterclockwise)

Preceding gene: 18310255

Following gene: 18310253

Centisome position: 49.25

GC content: 33.04

Gene sequence:

>339_bases
ATGGAAAATATAGATAATGACTTATTAGAAGCAGCCGAAAGTTTAGGAGCTAATAGATTAAAAGCATTCTTTAAAGTTGT
ATTTCCACTTAGCTTACCAGGATTAATAGTTGGAACAGTTTTGGTATTTACAGGTTCCTTAACAGCTTACACAACACCTC
AATTATTAGGAGGAAATAAAAATACGGTTTTAGCAACTTTAATATACCAAAAAACTATGACATTAGGTGATTGGCAAGGG
GCCGCAGTTGTAGCAACAATAATGATTGTAGTCACTTTAATAGTAATAAAGGGGATTAACTTCCTAGCATCAAGATTAGA
TAAGAGAGGGGTTTCTTAA

Upstream 100 bases:

>100_bases
AATACAAGAGCCATTATCACTACTATATACAGAAGGAGCTATTATAATAGGTACAATTTATATTTTCTTACCACTTATGA
TTATATCCCTAGTAGGAGTT

Downstream 100 bases:

>100_bases
AGTGAAGAAGAGCAAAGTATTAACAACCTTCGTTGTTTTGGTTTATATATTTCTATTTGCACCGCTAGTAATTATTGCCA
TGACTAGTATAGGAACAGAA

Product: hypothetical protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MENIDNDLLEAAESLGANRLKAFFKVVFPLSLPGLIVGTVLVFTGSLTAYTTPQLLGGNKNTVLATLIYQKTMTLGDWQG
AAVVATIMIVVTLIVIKGINFLASRLDKRGVS

Sequences:

>Translated_112_residues
MENIDNDLLEAAESLGANRLKAFFKVVFPLSLPGLIVGTVLVFTGSLTAYTTPQLLGGNKNTVLATLIYQKTMTLGDWQG
AAVVATIMIVVTLIVIKGINFLASRLDKRGVS
>Mature_112_residues
MENIDNDLLEAAESLGANRLKAFFKVVFPLSLPGLIVGTVLVFTGSLTAYTTPQLLGGNKNTVLATLIYQKTMTLGDWQG
AAVVATIMIVVTLIVIKGINFLASRLDKRGVS

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787369, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=5e-15,
Organism=Escherichia coli, GI1787080, Length=98, Percent_Identity=36.734693877551, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 11953; Mature: 11953

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIDNDLLEAAESLGANRLKAFFKVVFPLSLPGLIVGTVLVFTGSLTAYTTPQLLGGNK
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCHHHHCCCC
NTVLATLIYQKTMTLGDWQGAAVVATIMIVVTLIVIKGINFLASRLDKRGVS
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENIDNDLLEAAESLGANRLKAFFKVVFPLSLPGLIVGTVLVFTGSLTAYTTPQLLGGNK
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHCCHHHHCCCC
NTVLATLIYQKTMTLGDWQGAAVVATIMIVVTLIVIKGINFLASRLDKRGVS
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]