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The map label for this gene is potB [C]

Identifier: 18310255

GI number: 18310255

Start: 1493064

End: 1493399

Strand: Reverse

Name: potB [C]

Synonym: CPE1273

Alternate gene names: 18310255

Gene position: 1493399-1493064 (Counterclockwise)

Preceding gene: 18310256

Following gene: 18310254

Centisome position: 49.26

GC content: 29.17

Gene sequence:

>336_bases
ATGAGGAAAATAAGCCAGTATTTATTATTTATACCCTGCATAGTATTAGTAGCATATTTTATGATAGTTCCATTAGTAGA
TGTAATAATTCCTACTTTCACTAATACAAATGGTGGTATGTTTAGTGCCTATAAAGAATTTTTCACAGATTCTTATATGA
TGTCAATATTTTGGAGAACCATTAAGATATCTTTAGTATCATCTATAATTTGCATGTTTATAGGTGTGCCAGTTTCTTAT
TACATATCAAGAGTTTCTAAAAAGGTGAGAAGTTTTCTTATAGCCTTAACAGTCTTTCCCATATTAACAAACTCAGTTGT
TCGTCATTTGCTTTGA

Upstream 100 bases:

>100_bases
TATATTGACAATATACGCAATAAAAAGTAGAATAAAATTAAATTATGTAGAAATTAAAAACAGTGAGTAAAGATACAGCA
CTTAGAGACGGAGGAAAAAC

Downstream 100 bases:

>100_bases
TGAGTATCTTAGGAAAAAATGGATAATCAATAGTTAATTAATGAAGTTTAATTTAATACAAGAGCCATTATCACTACTAT
ATACAGAAGGAGCTATTATA

Product: hypothetical protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter; ABC Transporter Permease Protein; Spermidine/Putrescine ABC Transporter Permease Protein; ABC Transporter Permease

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRKISQYLLFIPCIVLVAYFMIVPLVDVIIPTFTNTNGGMFSAYKEFFTDSYMMSIFWRTIKISLVSSIICMFIGVPVSY
YISRVSKKVRSFLIALTVFPILTNSVVRHLL

Sequences:

>Translated_111_residues
MRKISQYLLFIPCIVLVAYFMIVPLVDVIIPTFTNTNGGMFSAYKEFFTDSYMMSIFWRTIKISLVSSIICMFIGVPVSY
YISRVSKKVRSFLIALTVFPILTNSVVRHLL
>Mature_111_residues
MRKISQYLLFIPCIVLVAYFMIVPLVDVIIPTFTNTNGGMFSAYKEFFTDSYMMSIFWRTIKISLVSSIICMFIGVPVSY
YISRVSKKVRSFLIALTVFPILTNSVVRHLL

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12778; Mature: 12778

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKISQYLLFIPCIVLVAYFMIVPLVDVIIPTFTNTNGGMFSAYKEFFTDSYMMSIFWRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IKISLVSSIICMFIGVPVSYYISRVSKKVRSFLIALTVFPILTNSVVRHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRKISQYLLFIPCIVLVAYFMIVPLVDVIIPTFTNTNGGMFSAYKEFFTDSYMMSIFWRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IKISLVSSIICMFIGVPVSYYISRVSKKVRSFLIALTVFPILTNSVVRHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA