| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310232
Identifier: 18310232
GI number: 18310232
Start: 1457655
End: 1458872
Strand: Reverse
Name: 18310232
Synonym: CPE1250
Alternate gene names: NA
Gene position: 1458872-1457655 (Counterclockwise)
Preceding gene: 18310233
Following gene: 18310231
Centisome position: 48.12
GC content: 20.85
Gene sequence:
>1218_bases ATGTTAGTTAAAGAATATGAAGTAAAAGTTTCTAAAGATAAAGAGAAAAATAAGGTTTTTTATAATTCACAGAGTTTAAA TGAGAAGTTTTTAAAGCTATATATGCATATAAAAGAATATGAAAAGGAAAATAAACTATTAATAATGATTTTAAAGTTAA GAGAATATATAAAGGATTTAAAAATAGAATTAGAATCCTTAGAAAAATGTGCAAGTAGCAATGGGGAGGATAATAAAATA AACTATTTTTTAAAGAAAGCAAAAAGAGAATTTAAGGAGATAGATATAAAACTTAACTCTATAAATAAAGATAATTTTAA ATCTTTAGAAGAGGAATTAATAGATGAAGTTCTATTAAATTTAAAGTATAAATTATTAGAATCTATTAAAGAGTATAATG AAGAGTTAAACAGGGATTATTTATATCACAATGAGTTAAGAGTTGATTTTGGAATTCAATGTAAGGATTTAAAAGAAAAG TTCTTAGAAGAATTAAAAACTTATCTAGAAAGTTCTTCTAAAAGAATTAAAGAAAATATTAATTTAAAAAGCAAAGTAGT ATTAAAGGAAATAAAATTATCTTCAAAGGAAGATATTAATTTAGACCTAGTAGATATAATAAAAAATGATATTTTAGAAT TAAATTCTGTAAATGAGGAAATATTTAATATTTATAAAAAATATGAGAAAGCAATCCATGAGAGTTTTTTTGAAAGTTTA AATAAATTAGGAATAAAGAAATCAGATAACCTTGTTTCATATAAATGTGAAAAGGTTGATTATACTTCCTTAAATAAGAG ATTTTTTAAGCTTATAGAATCTTTCAACAAGGGATTTTTAAAAAATAAAATTTTAATTGATATAGAGAATTTCATAGGAC ATGAAAATATAGAAAATAAAATGGAAATAGAACTTTTATACGCCTTAGATTTATTTAAGGAAGAGTATATTAAAAGCATA GAGGAGTTAATTTTAAACTTGAAAGAAAGATTAGAGGAAAATATATATTCTAATTTTGAAGGTGATTATGGAAAGTTATT TTCAGTAGAAGGTCAAAGTGAAATCTTAAATAATATGTATTTAAATTTAAAAAATGTAGAATCAAATAATTTTAATAAAA TAACCTTAGTTGATTATTTAAACAATAGCAAAAGAGAGATATCAAAATATAGCAATAAAACTCACAACCATATTTCTAGA ATTAATAGAATTCCCTAA
Upstream 100 bases:
>100_bases CCATGAAGAGTTAAAAAGTGAATTAGATAAAAAATATTACTTTTTAGTAATTAGCATAGTAATTGTAGGCATTTTAGCAG TTTTATTTTAGGAGAAAACA
Downstream 100 bases:
>100_bases GAATTTATAATAATTGCTTAAGATATTACTAAAGCTTCAAAAGTTAAGTTAAAGTCAAAAGTTTTAATTTTGATTTTTAA ATTTATACAATGGAGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDLKIELESLEKCASSNGEDNKI NYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLNLKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEK FLEELKTYLESSSKRIKENINLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENKMEIELLYALDLFKEEYIKSI EELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMYLNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISR INRIP
Sequences:
>Translated_405_residues MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDLKIELESLEKCASSNGEDNKI NYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLNLKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEK FLEELKTYLESSSKRIKENINLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENKMEIELLYALDLFKEEYIKSI EELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMYLNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISR INRIP >Mature_405_residues MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDLKIELESLEKCASSNGEDNKI NYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLNLKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEK FLEELKTYLESSSKRIKENINLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENKMEIELLYALDLFKEEYIKSI EELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMYLNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISR INRIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48445; Mature: 48445
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDL CCCCHHEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH KIELESLEKCASSNGEDNKINYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHH LKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEKFLEELKTYLESSSKRIKENI HHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENK HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHCCCCCCCCH MEIELLYALDLFKEEYIKSIEELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH LNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISRINRIP HEEEECCCCCCCEEEEEEHHCCCHHHHHHHHCHHHHHHHHHCCCC >Mature Secondary Structure MLVKEYEVKVSKDKEKNKVFYNSQSLNEKFLKLYMHIKEYEKENKLLIMILKLREYIKDL CCCCHHEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH KIELESLEKCASSNGEDNKINYFLKKAKREFKEIDIKLNSINKDNFKSLEEELIDEVLLN HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHH LKYKLLESIKEYNEELNRDYLYHNELRVDFGIQCKDLKEKFLEELKTYLESSSKRIKENI HHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NLKSKVVLKEIKLSSKEDINLDLVDIIKNDILELNSVNEEIFNIYKKYEKAIHESFFESL CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKLGIKKSDNLVSYKCEKVDYTSLNKRFFKLIESFNKGFLKNKILIDIENFIGHENIENK HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHCCCCCCCCH MEIELLYALDLFKEEYIKSIEELILNLKERLEENIYSNFEGDYGKLFSVEGQSEILNNMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH LNLKNVESNNFNKITLVDYLNNSKREISKYSNKTHNHISRINRIP HEEEECCCCCCCEEEEEEHHCCCHHHHHHHHCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA