Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310233

Identifier: 18310233

GI number: 18310233

Start: 1458882

End: 1459865

Strand: Reverse

Name: 18310233

Synonym: CPE1251

Alternate gene names: NA

Gene position: 1459865-1458882 (Counterclockwise)

Preceding gene: 18310234

Following gene: 18310232

Centisome position: 48.16

GC content: 28.46

Gene sequence:

>984_bases
ATGGAGAATAGGAATGAAGATAACTTAATAGATGAATTTAATGAATTAGTTTCAGAAATAAGTAAATCGGTCTTTGATAA
ATCTATTTATAGGGATTTAAAACTTACAGAAGAAAATTTAATAAAGACCCTTACAAGTACTTCAGAAAAAACTGCTACAA
TAAATAGAAATAACTTAATAAGTTTACAAAATAATTTAAAGGTAATATTAGATGAAGCTATAGCAGACTTTAATTTAGGG
GTTCAGCAAGGGGAAGAAGCCTTTGAGAAAAAAGCTAATGAGTTTTTAAATAATATAGAAGAGGTATCTACTAAGTCAAA
AGAAAACATTTACCATTTAAAAGATAAGGCAAAGGAAACCTATGATGAAATAGAAAGGTTAAAGGAGCAAGTAGATGGAA
TAAATAAAAATATAGGGGAATTATCAGAGGAAGAAGGAATTGAAAATATAGCTAATTTACAAAGAATAGGCAGGGAATTA
AGTGAAAAGATAAGGACAAGCAACCACATAGCTAAGGAGCATATAGAAAAAATAGAAGAGATGGATAAAATGCTAAAAGG
CGAATGCTTAAGAGTTATGAACTGCGTCAATAAACTAGAAAATAGGTTAAAGGTTGATAAGAGTGAAATTAGAGATAATT
TTTTAGGCTTTAAGGAATATATGGGGGAAGGCCTTGAAGAGATAAATTATAATATTAAGTTAGAGTTTAATGAAATAAAG
GATCTTTTAGAAGAGGGAAATACAAATATGAATAACTCTATGGAATTATTAAATAGTGCCATAGATAAGTACAATGTTGA
TGTAATAGATGCCACAAGAAGGCTTGGGGAGAGGGTCAATAATTTAGATAGAAAAATATCTAATATGAATAAGGGACCTG
AGGAACCATTTTTCCATGAAGAGTTAAAAAGTGAATTAGATAAAAAATATTACTTTTTAGTAATTAGCATAGTAATTGTA
GGCATTTTAGCAGTTTTATTTTAG

Upstream 100 bases:

>100_bases
AAGAGAGCTTGAATTTTATGACTTTTAATGAAGAGATTTAGTAATAAATGAAGATTTATAGTATATAAACTCATATTAGG
TAGTGGGGTAGGAGGAAGTT

Downstream 100 bases:

>100_bases
GAGAAAACAATGTTAGTTAAAGAATATGAAGTAAAAGTTTCTAAAGATAAAGAGAAAAATAAGGTTTTTTATAATTCACA
GAGTTTAAATGAGAAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MENRNEDNLIDEFNELVSEISKSVFDKSIYRDLKLTEENLIKTLTSTSEKTATINRNNLISLQNNLKVILDEAIADFNLG
VQQGEEAFEKKANEFLNNIEEVSTKSKENIYHLKDKAKETYDEIERLKEQVDGINKNIGELSEEEGIENIANLQRIGREL
SEKIRTSNHIAKEHIEKIEEMDKMLKGECLRVMNCVNKLENRLKVDKSEIRDNFLGFKEYMGEGLEEINYNIKLEFNEIK
DLLEEGNTNMNNSMELLNSAIDKYNVDVIDATRRLGERVNNLDRKISNMNKGPEEPFFHEELKSELDKKYYFLVISIVIV
GILAVLF

Sequences:

>Translated_327_residues
MENRNEDNLIDEFNELVSEISKSVFDKSIYRDLKLTEENLIKTLTSTSEKTATINRNNLISLQNNLKVILDEAIADFNLG
VQQGEEAFEKKANEFLNNIEEVSTKSKENIYHLKDKAKETYDEIERLKEQVDGINKNIGELSEEEGIENIANLQRIGREL
SEKIRTSNHIAKEHIEKIEEMDKMLKGECLRVMNCVNKLENRLKVDKSEIRDNFLGFKEYMGEGLEEINYNIKLEFNEIK
DLLEEGNTNMNNSMELLNSAIDKYNVDVIDATRRLGERVNNLDRKISNMNKGPEEPFFHEELKSELDKKYYFLVISIVIV
GILAVLF
>Mature_327_residues
MENRNEDNLIDEFNELVSEISKSVFDKSIYRDLKLTEENLIKTLTSTSEKTATINRNNLISLQNNLKVILDEAIADFNLG
VQQGEEAFEKKANEFLNNIEEVSTKSKENIYHLKDKAKETYDEIERLKEQVDGINKNIGELSEEEGIENIANLQRIGREL
SEKIRTSNHIAKEHIEKIEEMDKMLKGECLRVMNCVNKLENRLKVDKSEIRDNFLGFKEYMGEGLEEINYNIKLEFNEIK
DLLEEGNTNMNNSMELLNSAIDKYNVDVIDATRRLGERVNNLDRKISNMNKGPEEPFFHEELKSELDKKYYFLVISIVIV
GILAVLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37952; Mature: 37952

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRNEDNLIDEFNELVSEISKSVFDKSIYRDLKLTEENLIKTLTSTSEKTATINRNNLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEE
SLQNNLKVILDEAIADFNLGVQQGEEAFEKKANEFLNNIEEVSTKSKENIYHLKDKAKET
EHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDEIERLKEQVDGINKNIGELSEEEGIENIANLQRIGRELSEKIRTSNHIAKEHIEKIEE
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDKMLKGECLRVMNCVNKLENRLKVDKSEIRDNFLGFKEYMGEGLEEINYNIKLEFNEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEEEHHHHH
DLLEEGNTNMNNSMELLNSAIDKYNVDVIDATRRLGERVNNLDRKISNMNKGPEEPFFHE
HHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ELKSELDKKYYFLVISIVIVGILAVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MENRNEDNLIDEFNELVSEISKSVFDKSIYRDLKLTEENLIKTLTSTSEKTATINRNNLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEE
SLQNNLKVILDEAIADFNLGVQQGEEAFEKKANEFLNNIEEVSTKSKENIYHLKDKAKET
EHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDEIERLKEQVDGINKNIGELSEEEGIENIANLQRIGRELSEKIRTSNHIAKEHIEKIEE
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDKMLKGECLRVMNCVNKLENRLKVDKSEIRDNFLGFKEYMGEGLEEINYNIKLEFNEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEEEHHHHH
DLLEEGNTNMNNSMELLNSAIDKYNVDVIDATRRLGERVNNLDRKISNMNKGPEEPFFHE
HHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ELKSELDKKYYFLVISIVIVGILAVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA