| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is mprF [H]
Identifier: 18310229
GI number: 18310229
Start: 1452739
End: 1455294
Strand: Reverse
Name: mprF [H]
Synonym: CPE1247
Alternate gene names: 18310229
Gene position: 1455294-1452739 (Counterclockwise)
Preceding gene: 18310230
Following gene: 18310227
Centisome position: 48.01
GC content: 27.54
Gene sequence:
>2556_bases GTGAAGTTAAATATAAAGATAAGTGACAAATTAAAATTATTTTTTAAGATAGCATTCGTTTCCGTAGTAATACTATTTAT AGTTAGGGAATTTACTTCAGTATTTAAAAATTTCAACTCAGAATATTTCTTTATGTATAGAAATAAACTAGACTTTTTAA ACCTATTAATAATTGCAGCATTAGGTATAATTTCTTACATTCCTTTATCTTTCTACGATTTTATTTTAAAGAGAAAAGTT GGAATAAGATTAAAAAATAGAAAGCTATATAAGTATTCTTGGATAGCAAGTTCCATTGCAAGTTTACTTGGGTTTGGAGG AGCTACATCCTTAGCTTTTAAACAGTATTTTTATGGTGACTATGTAGATGATAAAAAGAAATTATTAAAAGAAATTGGTA AAATAGTAGCCTTAAACTTAACAGGCTTATCAATAGTTTGTTGTACATATATGGGGATTAGAATATCCTCTTGGAATAAC CTAGGTATAATAAAATATGCCATAGGAATAATAGCTTTATATGCACCAGGATTTATAATTTACTCAGCTTATAAATATAG CAAAACAAAGGACAAGTTAGAGTTTTTCAGTACCTTAGGTATTATATTCATATCATTTTTAGAGTGGCTTACAACGATAA TTCTAATTTATGCTACTTTAAGAATAACAGGAGCATCAATAAGTGTTTTAACTTTCTTACCAATATATATTGAGGCAGCA GTTGTTGGAATGATCAGTATGATTCCAGGGGGAATTGGTACCTTTGACTTAACTTTTATGACTGGATTAGAGGTCTTAGG CATTCCTATAGAACAAACCCTATTAGTTATAATACTTTATAGAATAAGTTATTATATAGTTCCAGCTCTTATAGGTGTAT TACTTTTTGTACATGATTTCGGTGGTAAAATAAACAAGAAGTTTAATGGATTACCTTATGAAATAGTTTCTAAGGTGGCT TATAAGATAGTGGTTTCTTTAGTATTTATATCAGGAGCTATTATAGTTTTATCAAATATAGCACCTCAATATTTATTAAA AATAAAATTATTAAAAGAAATTTTAGGTAAACAGGTATTAGGTTTATCAATTGGAATGAGCGTAGTATTAGGATTTTTAA TAATGCTTGCAGCTCTTATGCTAAAATATAGGGCTAAAAGTATTTACAAAGCAAGTATGGTTTTATTTATATTAGGAATA ATATTATCCTTAACAAAGGGAATTAATCCTTATGAATTAGTATTTTTAATTATTGTAGCTTACCTTTTATATTTAAGTAA GAGAATGTTCTACAGGGATAGCTTTGTTGTAAGTTGTAAAAATACCTTAATAGATTCAGGTATATTAATTGCATCTTTTT CAATTTATTTCTTTATTTTAATTACCTTTGGAACACATCTTAAATATGTAGGAATAGTTCGTAAAATGCCTTATAAGATG GCATATAAATTTGGATTTATAGCCTTTGCTTTAGTAACTGTAATATATGTAGCTATTTACTTTTTAAATATAAGAAGAAA AATTCCTGTTAAGACTTTTGATCAGTGTAGCGAATATGTGGAAAAGATAATAGAAGAATACAAGGGTGATTCTCTAACAC ATTTAGTATTTTTAAAGGACAAGTATATTTATTTAAATGAAGATAAGGATCTTTTCATTCAATATGAAGTTTATGGAGAT AAGCTTTTTGTTTTGGGAAATCCTGTTGGAAATAATGAAAATCTATTTAGGGAAATAGAAAAGTTTTGTGAGTATGCTGA TAATTATGGTTACACACCAGTTTTTTACCAGGTTAATGATGAAATGATAAGTTACCTTCACTCTAATGGATATGATTTTA TGAAAATTGGAGAAGAAGCTAAGGTTGATGTAAAAGAATTTAAAGTTGTAGGAAATAAAATGAAGAGTTTAAAAACTTCA AGAAGTAAGGTCACTAAGGAAGGTTATACTTTCCACATGGTTGAACCACCTTTTTCAAAGGAATTTTTAGATTCCTTAAG AGAAATATCAGATGAATGGTTAGATGGAAGAAAAGAAAAAGGATTTTCAGTGGGATTCTTTGATGAAGATTATTTAAATA AAGCTCCTATAGCTATTTTAAAGGATAGAGAGGGAGAAATAAAAGCCTTTGCTAATATTATGTATATGTATGATAATGAA AGCTTCTCAGTGGATTTAATGAGATTTAGTAAAAATACTCCAAGGGGAGTTATGGATTTTATGTTCATAAATTTAATTGA GTATGGAAAAGAAAATGGCTATGAAATATTCAACATGGGAATGGCTCCTTTAGCAAATGTTGGTTTATCTAAATATGCTT TCTGGAATGAAAAATTAGCCCTTCAATTCTATGAGAATGGACAAGCACTTTACTCCTTTAAAGGATTAAGACGTTTTAAA GAGAAGTTTAGTCATAATTGGGAGTATAAATATATTGCTTACAGAAGAAATACATCTATACTAATAACAGTAATACAAGC AGCTATAGTTTGTTCAAGAAACAGAAATGTAGATGAAAGTATAGTTGTAAGAAACTTAAAAAGCTTAATTAAATAA
Upstream 100 bases:
>100_bases TTCTTACATTTTTGTAATGCAAATGAAATATTAATCAATGGATGTGAAGAAAGGTAAAGTGTATAATAAATTTGGATTTT AAACATGGGGAGGACAAAAG
Downstream 100 bases:
>100_bases AAAGTTGTATTTTAATATAGATTTAAAAGGACCAATTTTAGGTCCTTTTAATTTTATATTAAAATTATTGTTAATGTTAT TTTTGATTTTTTGATTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lysylphosphatidylglycerol synthase; LPG synthase [H]
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues MKLNIKISDKLKLFFKIAFVSVVILFIVREFTSVFKNFNSEYFFMYRNKLDFLNLLIIAALGIISYIPLSFYDFILKRKV GIRLKNRKLYKYSWIASSIASLLGFGGATSLAFKQYFYGDYVDDKKKLLKEIGKIVALNLTGLSIVCCTYMGIRISSWNN LGIIKYAIGIIALYAPGFIIYSAYKYSKTKDKLEFFSTLGIIFISFLEWLTTIILIYATLRITGASISVLTFLPIYIEAA VVGMISMIPGGIGTFDLTFMTGLEVLGIPIEQTLLVIILYRISYYIVPALIGVLLFVHDFGGKINKKFNGLPYEIVSKVA YKIVVSLVFISGAIIVLSNIAPQYLLKIKLLKEILGKQVLGLSIGMSVVLGFLIMLAALMLKYRAKSIYKASMVLFILGI ILSLTKGINPYELVFLIIVAYLLYLSKRMFYRDSFVVSCKNTLIDSGILIASFSIYFFILITFGTHLKYVGIVRKMPYKM AYKFGFIAFALVTVIYVAIYFLNIRRKIPVKTFDQCSEYVEKIIEEYKGDSLTHLVFLKDKYIYLNEDKDLFIQYEVYGD KLFVLGNPVGNNENLFREIEKFCEYADNYGYTPVFYQVNDEMISYLHSNGYDFMKIGEEAKVDVKEFKVVGNKMKSLKTS RSKVTKEGYTFHMVEPPFSKEFLDSLREISDEWLDGRKEKGFSVGFFDEDYLNKAPIAILKDREGEIKAFANIMYMYDNE SFSVDLMRFSKNTPRGVMDFMFINLIEYGKENGYEIFNMGMAPLANVGLSKYAFWNEKLALQFYENGQALYSFKGLRRFK EKFSHNWEYKYIAYRRNTSILITVIQAAIVCSRNRNVDESIVVRNLKSLIK
Sequences:
>Translated_851_residues MKLNIKISDKLKLFFKIAFVSVVILFIVREFTSVFKNFNSEYFFMYRNKLDFLNLLIIAALGIISYIPLSFYDFILKRKV GIRLKNRKLYKYSWIASSIASLLGFGGATSLAFKQYFYGDYVDDKKKLLKEIGKIVALNLTGLSIVCCTYMGIRISSWNN LGIIKYAIGIIALYAPGFIIYSAYKYSKTKDKLEFFSTLGIIFISFLEWLTTIILIYATLRITGASISVLTFLPIYIEAA VVGMISMIPGGIGTFDLTFMTGLEVLGIPIEQTLLVIILYRISYYIVPALIGVLLFVHDFGGKINKKFNGLPYEIVSKVA YKIVVSLVFISGAIIVLSNIAPQYLLKIKLLKEILGKQVLGLSIGMSVVLGFLIMLAALMLKYRAKSIYKASMVLFILGI ILSLTKGINPYELVFLIIVAYLLYLSKRMFYRDSFVVSCKNTLIDSGILIASFSIYFFILITFGTHLKYVGIVRKMPYKM AYKFGFIAFALVTVIYVAIYFLNIRRKIPVKTFDQCSEYVEKIIEEYKGDSLTHLVFLKDKYIYLNEDKDLFIQYEVYGD KLFVLGNPVGNNENLFREIEKFCEYADNYGYTPVFYQVNDEMISYLHSNGYDFMKIGEEAKVDVKEFKVVGNKMKSLKTS RSKVTKEGYTFHMVEPPFSKEFLDSLREISDEWLDGRKEKGFSVGFFDEDYLNKAPIAILKDREGEIKAFANIMYMYDNE SFSVDLMRFSKNTPRGVMDFMFINLIEYGKENGYEIFNMGMAPLANVGLSKYAFWNEKLALQFYENGQALYSFKGLRRFK EKFSHNWEYKYIAYRRNTSILITVIQAAIVCSRNRNVDESIVVRNLKSLIK >Mature_851_residues MKLNIKISDKLKLFFKIAFVSVVILFIVREFTSVFKNFNSEYFFMYRNKLDFLNLLIIAALGIISYIPLSFYDFILKRKV GIRLKNRKLYKYSWIASSIASLLGFGGATSLAFKQYFYGDYVDDKKKLLKEIGKIVALNLTGLSIVCCTYMGIRISSWNN LGIIKYAIGIIALYAPGFIIYSAYKYSKTKDKLEFFSTLGIIFISFLEWLTTIILIYATLRITGASISVLTFLPIYIEAA VVGMISMIPGGIGTFDLTFMTGLEVLGIPIEQTLLVIILYRISYYIVPALIGVLLFVHDFGGKINKKFNGLPYEIVSKVA YKIVVSLVFISGAIIVLSNIAPQYLLKIKLLKEILGKQVLGLSIGMSVVLGFLIMLAALMLKYRAKSIYKASMVLFILGI ILSLTKGINPYELVFLIIVAYLLYLSKRMFYRDSFVVSCKNTLIDSGILIASFSIYFFILITFGTHLKYVGIVRKMPYKM AYKFGFIAFALVTVIYVAIYFLNIRRKIPVKTFDQCSEYVEKIIEEYKGDSLTHLVFLKDKYIYLNEDKDLFIQYEVYGD KLFVLGNPVGNNENLFREIEKFCEYADNYGYTPVFYQVNDEMISYLHSNGYDFMKIGEEAKVDVKEFKVVGNKMKSLKTS RSKVTKEGYTFHMVEPPFSKEFLDSLREISDEWLDGRKEKGFSVGFFDEDYLNKAPIAILKDREGEIKAFANIMYMYDNE SFSVDLMRFSKNTPRGVMDFMFINLIEYGKENGYEIFNMGMAPLANVGLSKYAFWNEKLALQFYENGQALYSFKGLRRFK EKFSHNWEYKYIAYRRNTSILITVIQAAIVCSRNRNVDESIVVRNLKSLIK
Specific function: Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), one of the components of the bacterial membrane with a positive net charge. LPG synthesis contribu
COG id: COG2898
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LPG synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR022791 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: =2.3.2.3 [H]
Molecular weight: Translated: 97831; Mature: 97831
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIKISDKLKLFFKIAFVSVVILFIVREFTSVFKNFNSEYFFMYRNKLDFLNLLIIAA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH LGIISYIPLSFYDFILKRKVGIRLKNRKLYKYSWIASSIASLLGFGGATSLAFKQYFYGD HHHHHHHHHHHHHHHHHHHHCCEEECCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCC YVDDKKKLLKEIGKIVALNLTGLSIVCCTYMGIRISSWNNLGIIKYAIGIIALYAPGFII CCCHHHHHHHHHHHEEEEEECCHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHCCCEEE YSAYKYSKTKDKLEFFSTLGIIFISFLEWLTTIILIYATLRITGASISVLTFLPIYIEAA EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VVGMISMIPGGIGTFDLTFMTGLEVLGIPIEQTLLVIILYRISYYIVPALIGVLLFVHDF HHHHHHHCCCCCCCCHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGKINKKFNGLPYEIVSKVAYKIVVSLVFISGAIIVLSNIAPQYLLKIKLLKEILGKQVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH GLSIGMSVVLGFLIMLAALMLKYRAKSIYKASMVLFILGIILSLTKGINPYELVFLIIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YLLYLSKRMFYRDSFVVSCKNTLIDSGILIASFSIYFFILITFGTHLKYVGIVRKMPYKM HHHHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AYKFGFIAFALVTVIYVAIYFLNIRRKIPVKTFDQCSEYVEKIIEEYKGDSLTHLVFLKD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEC KYIYLNEDKDLFIQYEVYGDKLFVLGNPVGNNENLFREIEKFCEYADNYGYTPVFYQVND EEEEEECCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECH EMISYLHSNGYDFMKIGEEAKVDVKEFKVVGNKMKSLKTSRSKVTKEGYTFHMVEPPFSK HHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH EFLDSLREISDEWLDGRKEKGFSVGFFDEDYLNKAPIAILKDREGEIKAFANIMYMYDNE HHHHHHHHHHHHHHCCCCCCCCEECCCCHHHCCCCCEEEEECCCCCHHHHEEEEEEEECC SFSVDLMRFSKNTPRGVMDFMFINLIEYGKENGYEIFNMGMAPLANVGLSKYAFWNEKLA CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHEEECCCEE LQFYENGQALYSFKGLRRFKEKFSHNWEYKYIAYRRNTSILITVIQAAIVCSRNRNVDES EEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHH IVVRNLKSLIK HHHHHHHHHHC >Mature Secondary Structure MKLNIKISDKLKLFFKIAFVSVVILFIVREFTSVFKNFNSEYFFMYRNKLDFLNLLIIAA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH LGIISYIPLSFYDFILKRKVGIRLKNRKLYKYSWIASSIASLLGFGGATSLAFKQYFYGD HHHHHHHHHHHHHHHHHHHHCCEEECCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCC YVDDKKKLLKEIGKIVALNLTGLSIVCCTYMGIRISSWNNLGIIKYAIGIIALYAPGFII CCCHHHHHHHHHHHEEEEEECCHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHCCCEEE YSAYKYSKTKDKLEFFSTLGIIFISFLEWLTTIILIYATLRITGASISVLTFLPIYIEAA EEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VVGMISMIPGGIGTFDLTFMTGLEVLGIPIEQTLLVIILYRISYYIVPALIGVLLFVHDF HHHHHHHCCCCCCCCHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGKINKKFNGLPYEIVSKVAYKIVVSLVFISGAIIVLSNIAPQYLLKIKLLKEILGKQVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH GLSIGMSVVLGFLIMLAALMLKYRAKSIYKASMVLFILGIILSLTKGINPYELVFLIIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YLLYLSKRMFYRDSFVVSCKNTLIDSGILIASFSIYFFILITFGTHLKYVGIVRKMPYKM HHHHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AYKFGFIAFALVTVIYVAIYFLNIRRKIPVKTFDQCSEYVEKIIEEYKGDSLTHLVFLKD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEC KYIYLNEDKDLFIQYEVYGDKLFVLGNPVGNNENLFREIEKFCEYADNYGYTPVFYQVND EEEEEECCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECH EMISYLHSNGYDFMKIGEEAKVDVKEFKVVGNKMKSLKTSRSKVTKEGYTFHMVEPPFSK HHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH EFLDSLREISDEWLDGRKEKGFSVGFFDEDYLNKAPIAILKDREGEIKAFANIMYMYDNE HHHHHHHHHHHHHHCCCCCCCCEECCCCHHHCCCCCEEEEECCCCCHHHHEEEEEEEECC SFSVDLMRFSKNTPRGVMDFMFINLIEYGKENGYEIFNMGMAPLANVGLSKYAFWNEKLA CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHEEECCCEE LQFYENGQALYSFKGLRRFKEKFSHNWEYKYIAYRRNTSILITVIQAAIVCSRNRNVDES EEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHH IVVRNLKSLIK HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]