| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is cbiE [H]
Identifier: 18310207
GI number: 18310207
Start: 1427785
End: 1428396
Strand: Reverse
Name: cbiE [H]
Synonym: CPE1225
Alternate gene names: 18310207
Gene position: 1428396-1427785 (Counterclockwise)
Preceding gene: 18310208
Following gene: 18310206
Centisome position: 47.12
GC content: 26.8
Gene sequence:
>612_bases TTGGTTAAAATATTAGGATTAGGACCAGGCCATGAAGACTATATAATTCCTAAAGTTATTAAGGAACTAGAAAAAAGTGA TTATATAGTTGGTTTTGAAAGAGCAATTTCTAGCTTAAAGTTTTTAAATAGTATAAATGATGAAAGATTTAAGAGAGTAA AAGGTTTAAAAGAAATAATAGAATTTCTAAATGAAAATAAGGAAAAGAGGATTTCAATAGTTGCCTCAGGAGATCCAACC TTTTATGGAATTACAAATTATATATGTAAAAATTATGAGGGAGAAGTTTCTATTGTTCCTGGAATAAGTTCTTTTCAATA TTTAACATGCAGAGTTAATAAAACTTGGAATGATGCTTTTGTTGGAAGTATGCATGGAAGAGAAGAGAATTTTATAGAAG TTGTGAAGGAAAATAAACTTTCTATTTGGTTAACAGATAAAAAAAATACTCCTTTTGAGCTAAGTAAAAGGTTAATAGAA AATTCTATAGAATGTACTATATATGTTGGAGAAAATCTTTCTTATGAAGATGAAAATATAACAATTGGAAGCCCAAGAGA AATTTGCGAAAAGGATTATGGAGATTTATCTGTAATAATAATTGAAAGATAA
Upstream 100 bases:
>100_bases TATTCTTATGTACTATGGATCAAAGGAAATGAAGTTACTATATGAATCTAAAAATTCAAACTTGTTTGATTAAACTTAAA TTAGAAAGGAATGAAGGCTT
Downstream 100 bases:
>100_bases ATTTTCCTTTGGAGGATATATGAAGTTTATAAAAGATTCAGAGTTTATAAGAGGAAAATGTCCTATGACAAAAGAGGATA TTAGAATCCTTACTATTAGT
Product: precorrin-6y C5,15-methyltransferase (decarboxylating)
Products: S-adenosyl-L-homocysteine; Precorrin 8X; CO2
Alternate protein names: Cobalt-precorrin-6 methyltransferase; Cobalt-precorrin-6Y methylase [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEIIEFLNENKEKRISIVASGDPT FYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAFVGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIE NSIECTIYVGENLSYEDENITIGSPREICEKDYGDLSVIIIER
Sequences:
>Translated_203_residues MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEIIEFLNENKEKRISIVASGDPT FYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAFVGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIE NSIECTIYVGENLSYEDENITIGSPREICEKDYGDLSVIIIER >Mature_203_residues MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEIIEFLNENKEKRISIVASGDPT FYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAFVGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIE NSIECTIYVGENLSYEDENITIGSPREICEKDYGDLSVIIIER
Specific function: Probably catalyzes the methylation of C-5 in cobalt- precorrin-6Y to form cobalt-precorrin-7W-a [H]
COG id: COG2241
COG function: function code H; Precorrin-6B methylase 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR012818 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.132
Molecular weight: Translated: 23318; Mature: 23318
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEII CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EFLNENKEKRISIVASGDPTFYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAF HHHCCCCCCEEEEEECCCCCEEHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCE VGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIENSIECTIYVGENLSYEDENI EECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEE TIGSPREICEKDYGDLSVIIIER EECCCHHHHHCCCCCEEEEEEEC >Mature Secondary Structure MVKILGLGPGHEDYIIPKVIKELEKSDYIVGFERAISSLKFLNSINDERFKRVKGLKEII CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EFLNENKEKRISIVASGDPTFYGITNYICKNYEGEVSIVPGISSFQYLTCRVNKTWNDAF HHHCCCCCCEEEEEECCCCCEEHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCE VGSMHGREENFIEVVKENKLSIWLTDKKNTPFELSKRLIENSIECTIYVGENLSYEDENI EECCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEE TIGSPREICEKDYGDLSVIIIER EECCCHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 6Y
Specific reaction: 2 S-adenosyl-L-methionine + precorrin-6Y = 2 S-adenosyl-L-homocysteine + precorrin-8X + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]