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The map label for this gene is cbiD [H]

Identifier: 18310208

GI number: 18310208

Start: 1428424

End: 1429521

Strand: Reverse

Name: cbiD [H]

Synonym: CPE1226

Alternate gene names: 18310208

Gene position: 1429521-1428424 (Counterclockwise)

Preceding gene: 18310209

Following gene: 18310207

Centisome position: 47.16

GC content: 32.06

Gene sequence:

>1098_bases
ATGTTTGATATGTATATAGAAAGCGGTGGAAAGAAACTTAGATGTGGATACACTACAGGGTCTTGTGCAGCAGCTGCTGC
TAAAGCCGCCACTTATATGCTTTTTAATAAAAAAGACATAAGTGTTATAGAAATAGATACTCCTAAAAATATAAAACTTA
ATTTAGAAATACAAGATATACAGGTCGAAAAAAATTCAATATCTTGTTCCATAGTAAAAGATGGTGGAGATGATATAGAT
GCCACTTCAGGCCTTGAAATATTTGCAAAAGCAGAAGAAGTTGAAGAAGGCTTTGAACTATGTGGAGGAGAAGGTGTTGG
AGTAGTAACTAAAGAGGGTCTTTTTGTAGAAAAAGGACAACCTGCTATAAATCCAGTACCTAGAGAAATGATAAAGAAAG
AAGTCTTAAGTGTTCTTCCTAAGGATAAGGGAGTTAGAATAACAATTTTCGTTCCAAGAGGAAGAGAGATTGCTAAGAAA
ACATTTAACCCTAGATTAGGTATAGTTAATGGAATATCAATACTTGGTACCACAGGAATAGTTTATCCAATGTCAGAAGA
GGCATTAAAGGAATCTATTAGGATTGAAATAAGACAAAAAGCTGTAAACAATAAAGACCTTGTATTTGTATTTGGAAATA
TGGGAGAAAGATTCTTAAGAGAAAGAGGATACAAAAAGGATAATATAGTTGTTATATCTAATTATGTAGGTTTTTCTATA
GAGTGTGCCTTAGCTCAAGGAATAAAGGATTTAACCATAGTAGGACATATAGGAAAGTTAAGCAAGATTGCCTTTGGATG
TTTCAATACACATAGTAGGGTTTCAGATGTTAGATTAGAAGTTATAGCTCTAGAGCTTACCTTAATGGGATATGATTTAG
AACTAGTACAAAAAGTTTTAGATCAAAAAACAAGTGAAGGTGCCGTAAGACTTCTTGGAGAGGATTTTCCTATGTTATAT
GAAAGAATTGGAGAAAAGGTACTAAATAGATTAGATATATATGCTTATGGTGAAGCAAACTTTAATATTCTTATGTACTA
TGGATCAAAGGAAATGAAGTTACTATATGAATCTAAAAATTCAAACTTGTTTGATTAA

Upstream 100 bases:

>100_bases
TTAAGGGAAGAAAAGGTGGAAGTACAGTAGCAGCAGCTATAATAAATGCATTACTTTATATGAATTATAAAAGAGATATG
TAATAAAGAAGGTAATCTAA

Downstream 100 bases:

>100_bases
ACTTAAATTAGAAAGGAATGAAGGCTTTTGGTTAAAATATTAGGATTAGGACCAGGCCATGAAGACTATATAATTCCTAA
AGTTATTAAGGAACTAGAAA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MFDMYIESGGKKLRCGYTTGSCAAAAAKAATYMLFNKKDISVIEIDTPKNIKLNLEIQDIQVEKNSISCSIVKDGGDDID
ATSGLEIFAKAEEVEEGFELCGGEGVGVVTKEGLFVEKGQPAINPVPREMIKKEVLSVLPKDKGVRITIFVPRGREIAKK
TFNPRLGIVNGISILGTTGIVYPMSEEALKESIRIEIRQKAVNNKDLVFVFGNMGERFLRERGYKKDNIVVISNYVGFSI
ECALAQGIKDLTIVGHIGKLSKIAFGCFNTHSRVSDVRLEVIALELTLMGYDLELVQKVLDQKTSEGAVRLLGEDFPMLY
ERIGEKVLNRLDIYAYGEANFNILMYYGSKEMKLLYESKNSNLFD

Sequences:

>Translated_365_residues
MFDMYIESGGKKLRCGYTTGSCAAAAAKAATYMLFNKKDISVIEIDTPKNIKLNLEIQDIQVEKNSISCSIVKDGGDDID
ATSGLEIFAKAEEVEEGFELCGGEGVGVVTKEGLFVEKGQPAINPVPREMIKKEVLSVLPKDKGVRITIFVPRGREIAKK
TFNPRLGIVNGISILGTTGIVYPMSEEALKESIRIEIRQKAVNNKDLVFVFGNMGERFLRERGYKKDNIVVISNYVGFSI
ECALAQGIKDLTIVGHIGKLSKIAFGCFNTHSRVSDVRLEVIALELTLMGYDLELVQKVLDQKTSEGAVRLLGEDFPMLY
ERIGEKVLNRLDIYAYGEANFNILMYYGSKEMKLLYESKNSNLFD
>Mature_365_residues
MFDMYIESGGKKLRCGYTTGSCAAAAAKAATYMLFNKKDISVIEIDTPKNIKLNLEIQDIQVEKNSISCSIVKDGGDDID
ATSGLEIFAKAEEVEEGFELCGGEGVGVVTKEGLFVEKGQPAINPVPREMIKKEVLSVLPKDKGVRITIFVPRGREIAKK
TFNPRLGIVNGISILGTTGIVYPMSEEALKESIRIEIRQKAVNNKDLVFVFGNMGERFLRERGYKKDNIVVISNYVGFSI
ECALAQGIKDLTIVGHIGKLSKIAFGCFNTHSRVSDVRLEVIALELTLMGYDLELVQKVLDQKTSEGAVRLLGEDFPMLY
ERIGEKVLNRLDIYAYGEANFNILMYYGSKEMKLLYESKNSNLFD

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 40504; Mature: 40504

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDMYIESGGKKLRCGYTTGSCAAAAAKAATYMLFNKKDISVIEIDTPKNIKLNLEIQDI
CEEEEEECCCCEEEEECCCCHHHHHHHHHEEEEEEECCCCEEEEECCCCCEEEEEEEEEE
QVEKNSISCSIVKDGGDDIDATSGLEIFAKAEEVEEGFELCGGEGVGVVTKEGLFVEKGQ
EEECCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCEEEECCC
PAINPVPREMIKKEVLSVLPKDKGVRITIFVPRGREIAKKTFNPRLGIVNGISILGTTGI
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCCEECCEEEEECCCE
VYPMSEEALKESIRIEIRQKAVNNKDLVFVFGNMGERFLRERGYKKDNIVVISNYVGFSI
EEECCHHHHHHHHHEEEEHHCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECCCEEE
ECALAQGIKDLTIVGHIGKLSKIAFGCFNTHSRVSDVRLEVIALELTLMGYDLELVQKVL
EEEHHCCCCEEEEEECCCCHHHHEEEECCCCCCHHHEEEEEEEEEEEEECCCHHHHHHHH
DQKTSEGAVRLLGEDFPMLYERIGEKVLNRLDIYAYGEANFNILMYYGSKEMKLLYESKN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCEEEEECCCCEEEEEEECCCCEEEEEECCC
SNLFD
CCCCC
>Mature Secondary Structure
MFDMYIESGGKKLRCGYTTGSCAAAAAKAATYMLFNKKDISVIEIDTPKNIKLNLEIQDI
CEEEEEECCCCEEEEECCCCHHHHHHHHHEEEEEEECCCCEEEEECCCCCEEEEEEEEEE
QVEKNSISCSIVKDGGDDIDATSGLEIFAKAEEVEEGFELCGGEGVGVVTKEGLFVEKGQ
EEECCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCEEEECCC
PAINPVPREMIKKEVLSVLPKDKGVRITIFVPRGREIAKKTFNPRLGIVNGISILGTTGI
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCCEECCEEEEECCCE
VYPMSEEALKESIRIEIRQKAVNNKDLVFVFGNMGERFLRERGYKKDNIVVISNYVGFSI
EEECCHHHHHHHHHEEEEHHCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECCCEEE
ECALAQGIKDLTIVGHIGKLSKIAFGCFNTHSRVSDVRLEVIALELTLMGYDLELVQKVL
EEEHHCCCCEEEEEECCCCHHHHEEEECCCCCCHHHEEEEEEEEEEEEECCCHHHHHHHH
DQKTSEGAVRLLGEDFPMLYERIGEKVLNRLDIYAYGEANFNILMYYGSKEMKLLYESKN
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCEEEEECCCCEEEEEEECCCCEEEEEECCC
SNLFD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA