| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is cbiL [H]
Identifier: 18310205
GI number: 18310205
Start: 1426510
End: 1427172
Strand: Reverse
Name: cbiL [H]
Synonym: CPE1223
Alternate gene names: 18310205
Gene position: 1427172-1426510 (Counterclockwise)
Preceding gene: 18310206
Following gene: 18310204
Centisome position: 47.08
GC content: 31.22
Gene sequence:
>663_bases ATGGCAATATTATATGGAATAGGTGTAGGACCAGGAGATAGTGAACTATTAACAATAAAGGCAGTAAAGGCTATTGAAAA TAGTGATGTTATAGTAGCACCAAGTGCAGAAGAAGGTGGAGAGAGCATAGCATTAATAGCAGCTCAGGAATACATAAAAG AAGGAACAGAAATAGCTGTTAAACATTTCCCAATGGGAAAGAAAAACAGAGAATTAAAAGTTAAAGAGGCTTATGACTTT ATTTTAGAAAAACTTAAAGAAGGAAAAAATGTAAGTTTCTTAACTATAGGGGATCCTTATGTTTATAGTACTTATATACA TTTATTAAATTATGTAGAAGACCATGGTTTCCATGTAAAAACTATTCCAGGAATAACATCTTTCTGTGCTGCAGCTAGCA TAGTTGATAGAACATTAGTTGTAGGTAATGAACCATTACTTGTTCTGCCAGCAGGTAGAGTACATGACATAAAAGATGAA AAGTTCGTTGTAATAATGAAAGTTTATAAAAAAGAAGAAGAAGTTTTAGATGTTTTAGAAGAAAAAGGATTTGATTATGT TCTAGTTAGTAGAGCAGGTAGAGAAGGGGAAAAAGTTTTAAAAACTAGAGAAGAAATCTTAAATCATAGAGATTACATGT CTTTAATACTAGCAAGTAAATAG
Upstream 100 bases:
>100_bases AAATTTCTTTAGTTAACATAAGTAAAAATAGAGAAAATACATACATGATGATTAGCAATAATCCAATTTTTATTGTTAAG GCATTTAAGGAGGAAAATTA
Downstream 100 bases:
>100_bases AGAAAAATTATAAATAAAAAATCGTATTTTATTAGGAGGCAAAGGATAAAATGTTATATTTTATAGGTGCAGGTCCAGGA GCTGTTGATTTAATAACTGT
Product: cobalt-precorrin-2 C(20)-methyltransferase
Products: NA
Alternate protein names: S-adenosyl-L-methionine--cobalt-precorrin-2 methyltransferase [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAILYGIGVGPGDSELLTIKAVKAIENSDVIVAPSAEEGGESIALIAAQEYIKEGTEIAVKHFPMGKKNRELKVKEAYDF ILEKLKEGKNVSFLTIGDPYVYSTYIHLLNYVEDHGFHVKTIPGITSFCAAASIVDRTLVVGNEPLLVLPAGRVHDIKDE KFVVIMKVYKKEEEVLDVLEEKGFDYVLVSRAGREGEKVLKTREEILNHRDYMSLILASK
Sequences:
>Translated_220_residues MAILYGIGVGPGDSELLTIKAVKAIENSDVIVAPSAEEGGESIALIAAQEYIKEGTEIAVKHFPMGKKNRELKVKEAYDF ILEKLKEGKNVSFLTIGDPYVYSTYIHLLNYVEDHGFHVKTIPGITSFCAAASIVDRTLVVGNEPLLVLPAGRVHDIKDE KFVVIMKVYKKEEEVLDVLEEKGFDYVLVSRAGREGEKVLKTREEILNHRDYMSLILASK >Mature_219_residues AILYGIGVGPGDSELLTIKAVKAIENSDVIVAPSAEEGGESIALIAAQEYIKEGTEIAVKHFPMGKKNRELKVKEAYDFI LEKLKEGKNVSFLTIGDPYVYSTYIHLLNYVEDHGFHVKTIPGITSFCAAASIVDRTLVVGNEPLLVLPAGRVHDIKDEK FVVIMKVYKKEEEVLDVLEEKGFDYVLVSRAGREGEKVLKTREEILNHRDYMSLILASK
Specific function: Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012382 - InterPro: IPR006364 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.151 [H]
Molecular weight: Translated: 24454; Mature: 24322
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILYGIGVGPGDSELLTIKAVKAIENSDVIVAPSAEEGGESIALIAAQEYIKEGTEIAV CEEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEEEHHHHHHCCCEEEE KHFPMGKKNRELKVKEAYDFILEKLKEGKNVSFLTIGDPYVYSTYIHLLNYVEDHGFHVK EECCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEE TIPGITSFCAAASIVDRTLVVGNEPLLVLPAGRVHDIKDEKFVVIMKVYKKEEEVLDVLE ECCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCEEEEEEHHCCHHHHHHHHH EKGFDYVLVSRAGREGEKVLKTREEILNHRDYMSLILASK HCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHCCCC >Mature Secondary Structure AILYGIGVGPGDSELLTIKAVKAIENSDVIVAPSAEEGGESIALIAAQEYIKEGTEIAV EEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEEEHHHHHHCCCEEEE KHFPMGKKNRELKVKEAYDFILEKLKEGKNVSFLTIGDPYVYSTYIHLLNYVEDHGFHVK EECCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEE TIPGITSFCAAASIVDRTLVVGNEPLLVLPAGRVHDIKDEKFVVIMKVYKKEEEVLDVLE ECCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCEEEEEEHHCCHHHHHHHHH EKGFDYVLVSRAGREGEKVLKTREEILNHRDYMSLILASK HCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]