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The map label for this gene is citN [H]

Identifier: 18310134

GI number: 18310134

Start: 1345809

End: 1347149

Strand: Direct

Name: citN [H]

Synonym: CPE1152

Alternate gene names: 18310134

Gene position: 1345809-1347149 (Clockwise)

Preceding gene: 18310133

Following gene: 18310135

Centisome position: 44.4

GC content: 31.92

Gene sequence:

>1341_bases
ATGGAATTACAAAATAAAAAGATAGATGGTAAAGAAGAGAGCTTACTTAAAAAGTTTTTTAATATAAATCTTTTTGGGGT
TCCAATGTTATTGTTTTTAGTTGGAGCAATAATCATAATATTAGGTATATCAACAAATTCATTACCAAAGGATATGGTTG
GAAGTATATTTTTAATATTTACTTGTGGTATTGTTTTAGGTAAAATAGGTGATTCAATACCTATTTGGAAAGATTATTTA
GGTGGAGGGGCTATCTTAGCATTCTTAGTAACTTCATATGCAGTTTACATAGGATTAATTCCTACCACTTATGTAAAGGA
TGTCAAAACCCTTTTTGATAGTGGATTTTTAGAGTTATATATTTCAATAATGATTTGTGGTTCTTTATTAGCAATAGATA
GAAAATTCTTAGCAAAAACTGTTGGAGGTTTTATACCTATGGTGCTTATTGCAACCTTAACTGCTGCCTTAGGTGCTGTA
ATAGGAGGATTAATTACAGGAGTTTCTCCAAAAGAAGTTATATTAAATTATGCACTTCCTATTATGGGTGGTGGAAATGG
AGCCGGTGCTATTCCTATGAGCCAAATTTGGGGACAAGTAACAGGAAAAGATCCAAAGATATGGTATTCATCAGCAATGG
CAATATTAACAATTGCAAACATAATTGCAATATTAGCAGGTGCTATTTTAAATGGTATAGGTAATAAAAAACCTCAGCTT
ACAGGGAATGGAGAATTAATTAAAGGAGCAAAAAATGCAGAATCTACAAAATCTAATTTTAAAGCAACCTTTGAAGATGG
AGCCGCAGGTCTATTTATAACACTTGCTTTCTACTGTTTAGGAAATCTATTTGGAAAAGGATTCTTCCCAACAATAGGTG
GAGTTTTCATTCATCCATTTGCTTACATGGTTGTATTTGTGTTAATAGCTAGTGGATTTAACTTAGTTCCAGAAAGAATT
AGAGTTGGTGCAAAACAAGTTCAAAAATTTATGGTTGGTAATTTATTTTATGTTTTAATAGCAGGAGTTGGTATAGCAAT
GGTTGATTTTGGAGCTTTATTAAAGGCATTCAATTTAACAACTGTTATAATATCTTTAGGTGCAGTTATAGGAGCTATAT
TAGGTCCTTGGATAACTTCAAAAATATTTGGTTTCTATCCTATAGAAGCTTCCATAGCGGCAGGATTATGCCATGTTAAT
AGGGGAGGTTCTGGAGACTTAGAAATATTAGGAGCTGCTAAGAGAATGAATTTAATGGCATATGCTCAAATAGCAACTAG
ACTTGGTGGAGCAATTATATTAGTTTTAGCAGGATTCCTATTTAGTTTATGGCTAAAATAA

Upstream 100 bases:

>100_bases
AAAAAATAATACCTGGAGTATTTGATGGTGATATAGTTAAGTCTGTTTCTGAAACTGTGGTTAAAAATATTGAGAATTAG
TTAATTTAGGGGGAGTTTAT

Downstream 100 bases:

>100_bases
TTTAAATCAATACATATTTAAATATTAATTAAGAGAGATTTTATTTAAGTTAATAAATAGAGTCTCTCTTATTTTACTTG
AAAATTATTACTTAAATTAA

Product: citrate/sodium symporter

Products: NA

Alternate protein names: Citrate carrier protein; Citrate transporter [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MELQNKKIDGKEESLLKKFFNINLFGVPMLLFLVGAIIIILGISTNSLPKDMVGSIFLIFTCGIVLGKIGDSIPIWKDYL
GGGAILAFLVTSYAVYIGLIPTTYVKDVKTLFDSGFLELYISIMICGSLLAIDRKFLAKTVGGFIPMVLIATLTAALGAV
IGGLITGVSPKEVILNYALPIMGGGNGAGAIPMSQIWGQVTGKDPKIWYSSAMAILTIANIIAILAGAILNGIGNKKPQL
TGNGELIKGAKNAESTKSNFKATFEDGAAGLFITLAFYCLGNLFGKGFFPTIGGVFIHPFAYMVVFVLIASGFNLVPERI
RVGAKQVQKFMVGNLFYVLIAGVGIAMVDFGALLKAFNLTTVIISLGAVIGAILGPWITSKIFGFYPIEASIAAGLCHVN
RGGSGDLEILGAAKRMNLMAYAQIATRLGGAIILVLAGFLFSLWLK

Sequences:

>Translated_446_residues
MELQNKKIDGKEESLLKKFFNINLFGVPMLLFLVGAIIIILGISTNSLPKDMVGSIFLIFTCGIVLGKIGDSIPIWKDYL
GGGAILAFLVTSYAVYIGLIPTTYVKDVKTLFDSGFLELYISIMICGSLLAIDRKFLAKTVGGFIPMVLIATLTAALGAV
IGGLITGVSPKEVILNYALPIMGGGNGAGAIPMSQIWGQVTGKDPKIWYSSAMAILTIANIIAILAGAILNGIGNKKPQL
TGNGELIKGAKNAESTKSNFKATFEDGAAGLFITLAFYCLGNLFGKGFFPTIGGVFIHPFAYMVVFVLIASGFNLVPERI
RVGAKQVQKFMVGNLFYVLIAGVGIAMVDFGALLKAFNLTTVIISLGAVIGAILGPWITSKIFGFYPIEASIAAGLCHVN
RGGSGDLEILGAAKRMNLMAYAQIATRLGGAIILVLAGFLFSLWLK
>Mature_446_residues
MELQNKKIDGKEESLLKKFFNINLFGVPMLLFLVGAIIIILGISTNSLPKDMVGSIFLIFTCGIVLGKIGDSIPIWKDYL
GGGAILAFLVTSYAVYIGLIPTTYVKDVKTLFDSGFLELYISIMICGSLLAIDRKFLAKTVGGFIPMVLIATLTAALGAV
IGGLITGVSPKEVILNYALPIMGGGNGAGAIPMSQIWGQVTGKDPKIWYSSAMAILTIANIIAILAGAILNGIGNKKPQL
TGNGELIKGAKNAESTKSNFKATFEDGAAGLFITLAFYCLGNLFGKGFFPTIGGVFIHPFAYMVVFVLIASGFNLVPERI
RVGAKQVQKFMVGNLFYVLIAGVGIAMVDFGALLKAFNLTTVIISLGAVIGAILGPWITSKIFGFYPIEASIAAGLCHVN
RGGSGDLEILGAAKRMNLMAYAQIATRLGGAIILVLAGFLFSLWLK

Specific function: Uptake of citrate across the boundary membrane with the concomitant uptake of a sodium ion (symport system) [H]

COG id: COG3493

COG function: function code C; Na+/citrate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:citrate (SCF) symporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004679
- InterPro:   IPR018025 [H]

Pfam domain/function: PF03390 2HCT [H]

EC number: NA

Molecular weight: Translated: 47159; Mature: 47159

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQNKKIDGKEESLLKKFFNINLFGVPMLLFLVGAIIIILGISTNSLPKDMVGSIFLIF
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
TCGIVLGKIGDSIPIWKDYLGGGAILAFLVTSYAVYIGLIPTTYVKDVKTLFDSGFLELY
HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHH
ISIMICGSLLAIDRKFLAKTVGGFIPMVLIATLTAALGAVIGGLITGVSPKEVILNYALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IMGGGNGAGAIPMSQIWGQVTGKDPKIWYSSAMAILTIANIIAILAGAILNGIGNKKPQL
EEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TGNGELIKGAKNAESTKSNFKATFEDGAAGLFITLAFYCLGNLFGKGFFPTIGGVFIHPF
CCCCCEEECCCCCCHHHHHCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYMVVFVLIASGFNLVPERIRVGAKQVQKFMVGNLFYVLIAGVGIAMVDFGALLKAFNLT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIISLGAVIGAILGPWITSKIFGFYPIEASIAAGLCHVNRGGSGDLEILGAAKRMNLMA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH
YAQIATRLGGAIILVLAGFLFSLWLK
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELQNKKIDGKEESLLKKFFNINLFGVPMLLFLVGAIIIILGISTNSLPKDMVGSIFLIF
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
TCGIVLGKIGDSIPIWKDYLGGGAILAFLVTSYAVYIGLIPTTYVKDVKTLFDSGFLELY
HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHH
ISIMICGSLLAIDRKFLAKTVGGFIPMVLIATLTAALGAVIGGLITGVSPKEVILNYALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IMGGGNGAGAIPMSQIWGQVTGKDPKIWYSSAMAILTIANIIAILAGAILNGIGNKKPQL
EEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TGNGELIKGAKNAESTKSNFKATFEDGAAGLFITLAFYCLGNLFGKGFFPTIGGVFIHPF
CCCCCEEECCCCCCHHHHHCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AYMVVFVLIASGFNLVPERIRVGAKQVQKFMVGNLFYVLIAGVGIAMVDFGALLKAFNLT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIISLGAVIGAILGPWITSKIFGFYPIEASIAAGLCHVNRGGSGDLEILGAAKRMNLMA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH
YAQIATRLGGAIILVLAGFLFSLWLK
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577734; 8810332 [H]